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Information for unigene UN04328

FASTA Sequence
Unigene ID: UN04328Length: 1520 SSR 
GGAATCGAAGCTAGCTACGGCGACGGTTAACGACATCGGAGGAGCGTGGTGGTGGTGGTGGTGTCTCTATCAACACATTCGAGGAG
ATCTTTTTTTTTATAGTTTCGAAACAGTTAAAAATCATCGGAATTCACCCAATTCTCTTCTCTCATCCACCACCATCGTGCTTCCC
CATGGATTTGTCGCTTCTGTTGCTCCAAAGGGGATTAGGGTTTTGATTTTTTTTGTGATTCATTCACACCGCAATGCCTTTCAAGA
AGATAGTTCGTGAGCTTAGGGGTCGTAACAAAGCCATTGGTAGTAGGCGAGGAAGGTCTCACATTGCGCCTGAAGGATCTTCTTCT
TCTCTTTCTCCGTCTCCGTCTCCATCCACTGATGAATGTTCAGAACAGAGCATTTGGGTTGATTTGCCTCCTGAGTTACTTCTCGA
CATCATCCATCGGATTGAGTCTGGTCAGACTTTATGGCCTGGGAGGATAGACGTCGTCGCTTGCGCCTCCGTTTGTCGGTCCTGGA
GGGATATGACTAAACATGAAGTTGTTCAAGTTCCTGAGCTCTCTGGTCTCCTCACTTTTCCTCTTTCCTTAAAACAGCCTGGTCCG
AGAGATGCCCCCATTCAATGCTTTATCAAACGAGAAGAGCCACTGGGATTTACCGTCTCTATCTCGGTTTAAGCCCTGCTCTTTCT
GGCGACAAGAGTAAGCTCTTACTGTCGGCTAAGAAAGTCAGGAGGGCGACGGGTATGGAGTTTGTTATATCCTTGTCGGGAAATGA
TTTCTCAAGAAGTAGCACTAGTTACATAGGGAAACTAAGATCTAATTTCCTTGGAACTAAGTTCACGGTCTACGAGAACCAACCAC
CTCCGGTTTATTCCGAAAGATCATCATCCAACCGGAAGCTACCACCATCGATGCGTGTGTCTCCATGGGTATCATCTTCTACTCAT
AGTTACAACATGGCTTCGATCTTGTATGAGCTGAATGTACTCAGAACCAGAGGTCCAAGAAGAATGCAATGTATCATGAACAGCAT
CCCAGTTTCGTCTATTCAAGAAGGCGGACAAGTTCATTTTCCGACCGAGTTCACAAACCAAGGAAATAAGAAGAACAAGAAGTCGA
TGATGGATTTATGCACAGGGAACATGGGTGGAGAATCCGTTGTGAAGGAACCTTTGGTCCTGAAAAACAAGTCACCGAGGTGGCAC
GAGCAGCTCCAGTGCTGGTGTCTAAACTTCAAAGGGCGAGTCACCGTCGCCTCGGTGAAAAATTTCCAGCTAATTGCAGCTGCTGC
AGAAGCAGGGAAGAACATGAACATACCAGAGGAGGAGCAAGAGAGAGTGATACTACAGTTTGGGAAGATAGGGAAAGATATTTTCA
CCATGGATTATCGTTACCCGATCTCTGCATTCCAAGCATTTGCCATTTGTTTAAGCAGCTTCGACACGAAGCCTGTCTGCGAATGA
ATGTAACATATCGAATCAAATTCTCTATTTGCAGTTTGTTGTGTGTTTGACGAATGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175160 Tubby-like F-box protein 6 [Arabidopsis thaliana]12523e-135
AAG52638 unknown protein; 3155-1759 [Arabidopsis thaliana]12523e-135
NP_001185159 Tubby-like F-box protein 6 [Arabidopsis thaliana]12523e-135
XP_002891342 hypothetical protein ARALYDRAFT_473876 [Arabidopsis lyrata subsp. lyrata]12353e-133
XP_002510406 phosphoric diester hydrolase, putative [Ricinus communis]8761e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q0WPY0 Tubby-like F-box protein 612521e-136
Q8GVE5 Tubby-like F-box protein 27483e-078
Q10LG8 Tubby-like F-box protein 67198e-075
Q6NPQ1 Tubby-like F-box protein 116741e-069
Q944S3 Tubby-like F-box protein 54993e-049

TrEMBL top hits (Blast detail)Scoree value
B9R7W3 Phosphoric diester hydrolase, putative8768e-092
B9F208 Putative uncharacterized protein7853e-081
D6MKF0 Transcription factor (Fragment)7656e-079
B9H4C5 F-box family protein4521e-042
B9GRM5 F-box family protein4483e-042

Arabidopsis top hits (Blast detail)Scoree value
AT1G47270.1 AtTLP6 (TUBBY LIKE PROTEIN 6); phosphoric diester hydrolase/ transcription factor12538e-138
AT2G18280.1 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor7483e-079
AT2G18280.2 AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor7483e-079
AT5G18680.1 AtTLP11 (TUBBY LIKE PROTEIN 11); phosphoric diester hydrolase/ transcription factor6759e-071
AT1G43640.1 AtTLP5 (TUBBY LIKE PROTEIN 5); phosphoric diester hydrolase/ transcription factor4992e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
181  33%
 
211  33%

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