|
Information for unigene UN04330
FASTA Sequence |
Unigene ID: UN04330 | Length: 1756 |
SSR | | GGAAGCTCATCATAATACCAAAAGAGGAGTAGTGAAGAAACCGCCGCCATGGTTTCGCACTCAAGCTGTAGAATTATGCTTCTGGG
TCTGTTTATTATGGTGATTTCGAGCTGGGTTTCGGATAAAGTCCAAGCCTTTGGCGAATTCGGGTTCGAATTTCACCACCGTTTCT
CGGATCGGGTCGTTGGGGCTTTACCCGGAGATGGGTTGCTGCCTAGTCGAGGCTCGTCTCAGTATTACAGAGTGATGGCTCATCGA
GATAGAGTGATCAGAGGGCGTAGGCTCGCCACGACCGAGGATCAGTCCCTCGTCAGTTTCGCTGACGGCAATGAAACTGTTCGTGT
GGACGCCCTTGGATTTTTGCATTACGCGAATGTGACGGTCGGGACGCCGTCTGATTGGTTTCTGGTTGCTTTAGACACTGGAAGTG
ACTTGTTTTGGTTGCCCTGTGACTGTACCAATTGTGTCCGTCAACTCAAAGCACCTGGTGGCTCGAGCTTGGAGCTCAATATTTAT
AGCCCTAATGCATCTTCAACAAGTTCCAAAGTTCCTTGCAATAGCTCTCTATGTACAAGAGGTGATCGATGCGCTTCCCAAATAGT
AACTGCCCATACCAGATACGGTATCTTTCAAACGGTACTTCTTCTACTGGAGTATTGGTCGAAGATGTGCTTCACTTAGTTTCTAA
TGAGAAAAACTCCAAAGCTATTCCCGCTCGCGTTACCTTGGGATGTGGTCAAGTTCAGACCGGTGTGTTCCATGATGGTGCAGCTC
CAAACGGTCTTTTCGGGCTTGGCTTAGAAGACATATCGGTTCCAAGCGTATTAGCAAAGGAAGGAATCGCAGCTAACTCGTTCTCA
ATGTGTTTTGGAGACGATGGAGCTGGTAGGATCAGTTTTGGGGATAGAGGTAGCGTTGACCAACGAGAAACACCATTGAACATAAG
ACAACCACATCCTACTTACAACATCACCGTCACTCAAATAAGCGTCGGAGGAAACACCGGCGATCTTGAATTTGATGCTGTTTTCG
ACTCTGGAACCTCCTTCACTTATCTGACTTCTGAAGCTTACACGCTTATTTCAGAAAGTTTTAACTCTCTAGCTTTGGACAAACGT
TATCAGACTGACTCCGAGTTGCCTTTTGAGTACTGTTATGCATTAAGCCCAGACAAAGACAGCTTCCAGTATCCAGCTGTGAATCT
GACAATGAAAGGCGGGGGCTCATATCCTGTTTATCACCCTTTAGTAGTGATCCCCATGAAGGACACAGATGTCTACTGTTTAGGCG
TCATGAAGATCGAAGACATTAGCATCATCGGACAGAACTTCATGACTGGCTATCGTGTAGTCTTTGATCGTGAGAAACTGATTCTT
GGCTGGAAAGAATTTGATTGTTACACCGGTGAGACCTCGGCTAGGGCGCTTCCATCGAACCGTTCATCTTCATTGGCTAGACCGCC
AGCTTCTTCGTTTGAGCCAGAGGCCACCAACATACCATCTCAAAGACCAAGCACGTCGTCTTCCTCTTATTATTCTCTCTCGCTCT
CTATTTCATTCTTCTACTTCTCAGTTTTGGTCTTCCTTTGATTATACAATATTATACATATATATATATATATATATATATATATA
TATATATATACGTAGCCATCTGGTGCTACACACGAATTTATATTCTTTAGAAGATTAAATCACCAGCAAATATTGCACTACAGTTG
TACTTTTTGTTCCGTGTTATATATGATAATTTATTT
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002884082 aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] | 1573 | 2e-172 |
NP_849967 aspartyl protease-like protein [Arabidopsis thaliana] | 1572 | 3e-172 |
BAJ34248 unnamed protein product [Thellungiella halophila] | 1501 | 5e-164 |
XP_002269916 PREDICTED: hypothetical protein [Vitis vinifera] | 972 | 1e-102 |
B84556 hypothetical protein At2g17760 [imported] - Arabidopsis thaliana | 933 | 4e-098 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LX20 Aspartic proteinase-like protein 1 | 499 | 3e-049 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8VYV9 At2g17760/At2g17760 | 1572 | 2e-172 |
B9T719 Aspartic proteinase nepenthesin-1, putative | 929 | 7e-098 |
B3LF45 AT4G35880 protein | 891 | 2e-093 |
B9T721 Aspartic proteinase nepenthesin-2, putative | 891 | 2e-093 |
B9HH27 Predicted protein (Fragment) | 878 | 6e-092 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|