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Information for unigene UN04341
| FASTA Sequence |
| Unigene ID: UN04341 | Length: 862 |
SSR | | GGACACTCAATCTCTCTCTGCTCTCTCTCTCTGCTCTCTCTCTTTAAGTTTTTTCTCTCGAGAGAACTATAGAGAGAAAAAAGCCC
CCATTTTGCTATCTCTCCTTCGCTTCATAAACCCCACATTACTCAAAACAAAGCTAAAAAAACACCAAAGAGAGGAAGCCAAAATG
GATGGTGTTTCACCAAAGTTTGTGTTACCAGAGACATTCGACGGCGTGAAGATGGAGATCACAGGACAACTAGGCATGATCTGGGA
GCTTGTTAAAGCACCAGTCATTGTCCCTCTTCTCCAGCTAGCGGTTTACATCTGCTTGCTAATGTCGCTCATGCTGTTATGTGAGA
GGGTTTACATGGGAATCGTCATCGTCCTCGTCAAGCTCTTCTGGAAAAAACCCCACAAACGTTACAAGTTCGAGCCCATTCAAGAT
GATGAAGAGCTTGGAAGCTCTAACTTCCCTGTGGTCCTCGTCCAAATCCCCATGTTCAACGAACGAGAGGTATACAAGCTATCAAT
AGGAGCGGCGAGTGGACTAGCGTGGCCGTCCGATCGTCTCGTGATTCAAGTGTTGGATGACTCAACAGATCCTACTGTTAAGCAAA
TGGTGGAGATGGAGTGTCAAAGATGGGCAAGTAAAGGAATCAACATAAGGTACCAAATCAGAGAGAATAGAGTTGGCTACAAAGCC
GGTGCGTTAAAGGAAGGACTCAAACGCAGTTATGTCAAACATTGCGAGTATGTTGTCATCTTTGACGCTGATTTTCAGCCTGAACC
TGATTTTCTTCGACGTAGCATTCCGTTTCTTGTCCACAATCCAACATTGCACTCGTCCAGGCCCGATGGAGATTTGTAAATTCTGA
TG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197666 glucomannan 4-beta-mannosyltransferase 2 [Arabidopsis thaliana] | 1096 | 2e-117 |
| XP_002874083 hypothetical protein ARALYDRAFT_489123 [Arabidopsis lyrata subsp. lyrata] | 1096 | 2e-117 |
| XP_002312893 predicted protein [Populus trichocarpa] | 921 | 3e-097 |
| XP_002527445 transferase, transferring glycosyl groups, putative [Ricinus communis] | 914 | 2e-096 |
| XP_002328178 predicted protein [Populus trichocarpa] | 913 | 3e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNI7 Glucomannan 4-beta-mannosyltransferase 2 | 1096 | 7e-119 |
| Q9LZR3 Glucomannan 4-beta-mannosyltransferase 9 | 810 | 1e-085 |
| Q7PC76 Glucomannan 4-beta-mannosyltransferase 1 | 727 | 4e-076 |
| Q9ZQN8 Probable mannan synthase 7 | 667 | 4e-069 |
| Q9T0L2 Probable mannan synthase 15 | 661 | 2e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HQL2 Predicted protein | 921 | 2e-097 |
| B9SN76 Transferase, transferring glycosyl groups, putative | 914 | 1e-096 |
| B9MYK4 Predicted protein | 913 | 2e-096 |
| A5AUU4 Putative uncharacterized protein | 854 | 1e-089 |
| B4YYG1 Mannan synthase | 849 | 5e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G22740.1 ATCSLA02; mannan synthase/ transferase, transferring glycosyl groups | 1096 | 6e-120 |
| AT5G03760.1 ATCSLA09; mannan synthase/ transferase, transferring glycosyl groups | 810 | 9e-087 |
| AT2G35650.1 ATCSLA07 (CELLULOSE SYNTHASE LIKE); mannan synthase/ transferase, transferring glycosyl groups | 667 | 4e-070 |
| AT4G13410.1 ATCSLA15; cellulose synthase/ transferase, transferring glycosyl groups | 661 | 2e-069 |
| AT1G23480.1 ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3); cellulose synthase/ transferase, transferring glycosyl groups | 652 | 2e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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