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Information for unigene UN04350
| FASTA Sequence |
| Unigene ID: UN04350 | Length: 1331 |
SSR | | AGTGAAATAATTGTGATATTAAAATTTTACACCATAATAATTTTACACCATACAGGTAAGTTTGACTAAAATACAGAGAGAGGGTT
ACACAAGAACATGCGACTGGATCTGCGTTCTACTTACTTCCTGCGTATATGGACATATTCATCTGCATCTGAATGGCCTTCTCCTT
CTCCTCCCCTCTCCTCATGCTGCTTTGTTCTCTGGTGGCTTCCTGAAAACTTCGATAAGTATGAACCACCGTCTATTCTCTGCCTA
TTACATTATGCAACTTGACAAAGTCACCCAAGGTAAGCTCTTCTGGCCTCGAAGTGACTGGAAGACCTGCTACTCCAAGAGCTTTT
TCGATCTCAGGAGATGACGATAGGTGCTGGAGTGACTTTCTTAACATTTTTCTCTTCCCATTGAATGCAGAATTCACCAAAGAGAA
GAAACTTTTGGTGGAGGAAACATCGGGATAGTCCCTCGGATGCTTCAGTTTGAATGTTACAACAGCTGCGTCAACCTTGGGCTGAG
GGAAGAAGTTTTCCCTAGCAACTCTGAAATTGTATTCCGGTTCAGAATAGAAGTTGACCAAAATGTTGATGGGTCGGTATTCAGAT
GTTCGCAAAGCTGGCTCAACCAATCGCAGAGCTGCCTCATCCTGGAGTAAGAGAACAACGTGAGAGAAGATGTCACCCATAGGAAG
AAGAAGCTTGACAACATCAGTACTTATATTAAAAGGTAAGTTGGACACAACCTTTGCAAGAGCAAAATCTGGATGAGATAAGTTTC
TAGTCTCTAAAAAGGAGAGCATGTGAGAACGGATGTGAGACTTGACAAAATCCTCATGCAAAACCTTGAACTTGTTGGAACCTTGG
AATCTTTCTCGCACCAAATCCACCATATGAGGATCCTTGTCGATGGCAAGAACAGAAGCACCTAAGTTGAGAAGAACATTGGTCAA
AGAGCCAGTCCCAGGTCCAATCTCCAACACAAAGTCTCCTTCTTTCACATTTGCCGCAGCCGCTAACTGATCGTTGATGTCCGAAT
TCAGCATATAATGCTGTCCAAGGGATTTTCTGGGAAAGCGTCCTCGAGAATTGAGAGATTTGAGGGTTGCGTGGTAGTCATCATCT
GTGCTCTTACCGCCGCAACACACCTTCTTCTTCGTCTTCTTCCTCAGAAGAGATATATTCGAGCTCCTCCTTGAGAAATAGGCAGA
GGTTTCCCTCAGTGAAGTAGAATTATTGTCTCCGCTGTTCATCCATGATGATGGAGAGGAATTGATGGTTGATGTTATTGTTACTA
CTACACTCATCCTCTCTCTCTCTGTCTTTGCTCCCCGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_171690 Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] | 1387 | 6e-151 |
| XP_002889349 hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp. lyrata] | 1373 | 2e-149 |
| XP_002511789 dimethyladenosine transferase, putative [Ricinus communis] | 1082 | 1e-115 |
| XP_002270274 PREDICTED: hypothetical protein [Vitis vinifera] | 1075 | 8e-115 |
| ABN08249 SAM (and some other nucleotide) binding motif [Medicago truncatula] | 1032 | 8e-110 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6ME80 Ribosomal RNA small subunit methyltransferase A | 432 | 1e-041 |
| Q2RME8 Ribosomal RNA small subunit methyltransferase A | 322 | 7e-029 |
| B8D0I2 Ribosomal RNA small subunit methyltransferase A | 319 | 2e-028 |
| Q5LY12 Ribosomal RNA small subunit methyltransferase A | 317 | 3e-028 |
| Q5M2L6 Ribosomal RNA small subunit methyltransferase A | 317 | 3e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65090 Dimethyladenosine transferase | 1387 | 4e-151 |
| B9RDK0 Dimethyladenosine transferase, putative | 1082 | 9e-116 |
| A2Q3P9 SAM (And some other nucleotide) binding motif | 1032 | 6e-110 |
| D5ADG3 Putative uncharacterized protein | 944 | 9e-100 |
| B6TZW0 Dimethyladenosine transferase | 934 | 1e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G01860.1 PFC1 (PALEFACE 1); mRNA (2'-O-methyladenosine-N6-)-methyltransferase | 1388 | 2e-153 |
| AT2G47420.1 dimethyladenosine transferase, putative | 177 | 4e-013 |
| AT5G66360.1 ribosomal RNA adenine dimethylase family protein | 162 | 2e-011 |
| AT5G66360.2 ribosomal RNA adenine dimethylase family protein | 162 | 2e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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