Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN04352

FASTA Sequence
Unigene ID: UN04352Length: 1227 SSR 
GAAAATAAAAAAAAAATAAAAAAAATTTGAAAGTGTCACATTCGTCTTCTCCGATCCGATTCTTCTTCTTCATCTCCTCGCGTTCA
TCGAATTTTCCTAATCTCCACCTTCGAAATTGGAACTCAGATTCTCACCTGAGAGCTTCAAGATCATCATTACAGATCCAATGAGT
GGTCTCATCGACATGTAGAAGAAGAAGAAGAAAGTAGTAGTTTGATGACAATGGAGAAGGAATTCGATTCAAAGCTCACCCTACAA
GGCAACGACGGAGCGAGCATATCAAGAAGCAAAAGCTTCGCATTCAAAGCTCCTCAGGAGAATTTCAGCATCCAGGATTTCGAGCT
CGACAAGATCTATGGCGTTGGCTCTTACTCTAAGGTTGTTAGGGCGAAGAAGAAGGAGAACGGAGCAGTGTACGCGATGAAGATCA
TGGACAAGAAGTTTATCATCAAGGAGAATAAAACTGCTTATGTCAAGCTCGAGAGGATTGTTCTTGATCAGCTCGATCATCCTGGC
ATTATCAAACTCTTCTTCACCTTTCAAGATTCATTCTCATTATACATGGCACTTGAATCTTGTGAAGGTGGGGAGCTTTTCGACCA
GATCACTAGAAAAGGTCGTTTATCAGAGGATGAAGCTAGGTTCTACAGTGCACAAGTTGTGGATGCTCTTGAGTATATACATAATA
TGGGACTCATTCATCGAGATATCAAGCCGGAGAATCTGTTGCTGACTTCAGATGGACACATTAAGATTGCTGATTTTGGTAGTGTC
AAGCCTATGCAAGACAGCCAGATCACCCTTCTTCCCAATGCTTCTTCCGATGATAAGGCTTGCACTTTTGTTGGCACGGCTGCATA
TGTTCCTCCTGAAGTTCTCAACTCCTCTCCAGCAACTTTCGGAAACGATCTCTGGGCACTTGGCTGCACTCTCTACCAAATGCTTT
CAGGAACTTCCCCATTCAAGGATGCAAGTGAATGGCTGATTTTCCAAAGGATTATAGCTAGAGATATAAAGTTCCCTAATCATTTC
TCAGAAGCAGCAAGAGACCTCATCGACCGATTACTTGATACAGATCCCAGTAGAAGACCAGGAGCTGGATCAGAAGGTTATGCTTC
TCTCAAGAGACATCCTTTCTTCAAAGGTGTTGACTGGAAGAACGTAAGATCACAAACTCCTCCAAAACTAGCTCCGGATCCTTCGT
CTCAATCAGCATCTCCAGAGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882680 hypothetical protein ARALYDRAFT_897238 [Arabidopsis lyrata subsp. lyrata]16511e-181
NP_187665 3-phosphoinositide-dependent protein kinase [Arabidopsis thaliana]16359e-180
BAE99796 3-phosphoinositide-dependent protein kinase-1 like [Arabidopsis thaliana]16313e-179
AAG51370 putative 3-phosphoinositide-dependent protein kinase-1; 57432-54928 [Arabidopsis thaliana]16261e-178
NP_568138 3'-phosphoinositide-dependent protein kinase 1 [Arabidopsis thaliana]16062e-176

Swiss-Prot top hits (Blast detail)Scoree value
Q54PK9 3-phosphoinositide-dependent protein kinase B6221e-063
P34102 Protein kinase 35753e-058
Q39030 Serine/threonine-protein kinase AtPK195646e-057
O15530 3-phosphoinositide-dependent protein kinase 13971e-037
Q9Z2A0 3-phosphoinositide-dependent protein kinase 13971e-037

TrEMBL top hits (Blast detail)Scoree value
Q4V3C8 At3g1054016356e-180
Q0WSV2 3-phosphoinositide-dependent protein kinase-1 like16312e-179
Q9SQY4 3-phosphoinositide-dependent protein kinase-1, putative16267e-179
Q3E9L6 Putative uncharacterized protein At5g04510.216061e-176
Q9XF67 3-phosphoinositide-dependent protein kinase-116061e-176

Arabidopsis top hits (Blast detail)Scoree value
AT3G10540.1 3-phosphoinositide-dependent protein kinase, putative16353e-182
AT5G04510.2 PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); 3-phosphoinositide-dependent protein kinase/ kinase/ phosphoinositide binding / protein binding / protein kinase16068e-179
AT5G04510.1 PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); 3-phosphoinositide-dependent protein kinase/ kinase/ phosphoinositide binding / protein binding / protein kinase16068e-179
AT3G08720.1 S6K2 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2); kinase/ protein kinase5645e-058
AT3G08720.2 S6K2 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2); kinase/ protein kinase5645e-058

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
71  33%

Unigene MembersMember information