Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN04361

FASTA Sequence
Unigene ID: UN04361Length: 1137 SSR 
ACAAAAATTTACAGAGTTCATCACAATCTAGAGAAAGAGAGGCAGAGATACACTCAGTGGAAAAAACCTCAGCCGTCACTCTTAGT
TTAGATCAAGAAAGAGGAGAAGACCCGAAGAAAAGTCTTTGATTAAAAAGTCTTCGAGCAGATCAGAAGTCTACGAGATGAGAAGA
AAAGTCAGGAAACGGCGACGACCGGTTAGTACTCGAAGGAGAAGGACAAGGCAAGATGAAACCACCAACTCTTACGACGTTTCTGT
CCTCGCCTTGCCGTCTAGGAAGCATCCCGGCGGTGAGTTTAGCGAGAGCTGATGTGTACTCCACCAGTAGCTCAGCGAGGATTACG
ACAGAGATCATGGTCGATGATAACTTGAGAATCAGGTGAGGGATTAGAAGAGGAAGAAGAAGGATCTAGAAAGTATATTGCGTTTT
CTTCTTTTGTTCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGCTGAGCTCAGAGAAATCA
ATCGCAGTAATCTCGGAGAAGACAATGGCTGCCAAAACCCTAATCAGGTCGGGAGCTTCGCTGATTAATCGGTTTCTATCGAAGCC
AACGACGAACCTTTTTGTGCAGAACAATCTGAGATCGTTTCAGCAGATAGCTCCTCAGCGACAAGAACTCCCGCCGTGTTTTTTCC
CGTCGTTGACGAATCTACAGAACTCGCTTAGCGAAAGTGCTACGCTTAAGGAATTAAAGGAACGTGGGTTTCTTCACCCTTCTGGT
CTTCCTTCACTCGAGTTCTTCTTACCAGAAGTTGATCCATCAAGTGAGCCATTGCTTTTATTTCCCAAGAGGACATTCCAACCTAG
CACTATCAGGCGCAAACGTAACCATGGATTCTTTGCCCGCAAAGCAACCAAAGGTGGACGAAGAGTCATAGCTCGGAGAATAGCAA
AAGGGCGTCACAGAGTCACGGCCTAGAATTACCTCTCTTTAGTCCTTTCTATGAATCTATCAGATTAGGCCGGATAAGTATCTTCC
TTTGCGTCTTTCCAGGCTAGAAAATCTGAAACTTCCGTCTCATCAATAACAACAATAGATGTACTGTTGTGTTGAATCTCGGAGTC
GGAAGTGAAATTCATAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882857 structural constituent of ribosome [Arabidopsis lyrata subsp. lyrata]6232e-062
NP_001030692 Ribosomal protein L34 [Arabidopsis thaliana]6123e-061
XP_002327442 predicted protein [Populus trichocarpa]3623e-032
XP_002276959 PREDICTED: hypothetical protein [Vitis vinifera]3562e-031
XP_002521386 structural constituent of ribosome, putative [Ricinus communis]3525e-031

Swiss-Prot top hits (Blast detail)Scoree value
Q4FPR4 50S ribosomal protein L341632e-010
Q1QEW7 50S ribosomal protein L341632e-010
A5WBC0 50S ribosomal protein L341632e-010
Q47U32 50S ribosomal protein L341595e-010
A6W3V3 50S ribosomal protein L341578e-010

TrEMBL top hits (Blast detail)Scoree value
Q84R26 50S ribosomal protein L346122e-061
A9P9J1 50S ribosomal protein L343622e-032
B9S5W7 50S ribosomal protein L343523e-031
B7FGJ2 50S ribosomal protein L343381e-029
Q6ZZ86 50S ribosomal protein L343344e-029

Arabidopsis top hits (Blast detail)Scoree value
AT3G13882.1 structural constituent of ribosome6139e-064
AT3G13882.2 structural constituent of ribosome2832e-025
AT4G27652.1 unknown protein2652e-023
AT4G27657.1 unknown protein2321e-019
AT5G54145.1 unknown protein2151e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
71  50%

Unigene MembersMember information