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Information for unigene UN04391

FASTA Sequence
Unigene ID: UN04391Length: 953 SSR 
GGGAAGATGAGAAGAGGAAGCACGATTTAGCAAGGCTTCGATTTGTCGCTGTCAGATAGATTGAGGAGCTTTTTCCGCCGATCTTG
CTTCCCCCACGATGAGTTCCAATACGGCATCGTCGAGTGCCGGATCGGGAGATTCTTCCGCTGCCAGGAAGAATTCGAAGCGGCCA
AAGTATTCCAAGTTCACACAGCAGGAGCTTCCAGCCTGCAAGCCCATTCTCACGCCTGGCTGGGTGATTTCGACATTTTTGATAGT
CAGTGTGATCTTTATCCCCCTTGGAGTTATCTCTCTTTTCGCTTCCCAGGATGTTGTGGAGATCGTTGATCGGTACGATAATGATT
GCATTCCTGCCCCTGCTAGGACTAACAAAGTTGCATTTATTCAAGGAGATTCACCTAAAGCTTGTAACCGAACTCTAACAGTCAGT
CCCCACCCCCACCCCCACCCCCTTTCTTTTTTCTTCCATAAGTTATTGCATTTTTCTTGTTTTACTTTTTCCTTTTCTCCATTCTT
AAGTGACAAAACCTATGACTTCCTCTAAGAAGAGCAAGAGGAAGAGGACTGATGATGAAGATGTGGGTGAGGATGAGCACGCATCT
GACGATGAATCCAAGCCGCTGCAGATTTTGGTGGATAAGTTGAAGGGCAAGAAGAAGAAGAAGCAGGAGAAGGAATCCCCCAAAGA
AGAGACCAAAGAGTGAAGGACCCAAGGAAGAAGGGGAAGAGGGTGAAGAACCCAAGGAAGAAGGGGAAGAAGGTGAAGAACCCAAG
GAAGAAGAGGAAGAGGGTGAACAGGCTTAGACAAGAGAGTTTCGCAGTCTATCTCAATGTGCAAGTATTTTAGAAGAGTTTTAATT
TATACAGCTGAGTCTTACTTGGTTAAAGTATAGGACTTGTAGGGATTTTTAGGTTATGTTGATTCGAAAAATGTGCAGCCATAGGG
GTTGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564656 ALA-interacting subunit 3 [Arabidopsis thaliana]5065e-049
XP_002894565 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]4941e-047
XP_002882787 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]4545e-043
NP_566435 ALA-interacting subunit 1 [Arabidopsis thaliana]4492e-042
XP_002516421 conserved hypothetical protein [Ricinus communis]4062e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q9SLK2 ALA-interacting subunit 35062e-050
Q9LTW0 ALA-interacting subunit 14499e-044
Q8L8W0 ALA-interacting subunit 54013e-038
Q67YS6 Putative ALA-interacting subunit 22411e-019
Q9SA35 Putative ALA-interacting subunit 41863e-013

TrEMBL top hits (Blast detail)Scoree value
B9RRQ2 Putative uncharacterized protein4061e-037
B9HYB5 Predicted protein3674e-033
B9HI35 Predicted protein3657e-033
A9NVU5 Putative uncharacterized protein3612e-032
C5XW62 Putative uncharacterized protein Sb04g0049103612e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein5062e-051
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter4498e-045
AT1G79450.1 ALIS5 (ALA-Interacting Subunit 5)4013e-039
AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein3233e-030
AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein2411e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
102  67%

Unigene MembersMember information