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Information for unigene UN04405
| FASTA Sequence |
| Unigene ID: UN04405 | Length: 944 |
SSR | | GGGTGGATCTGATTTGCTATAATCAACTCTTAAGGGCGGGAAAGACGGCGAACGAGAGGGAGAGGGAGAAAAGATGGATTCTGAGA
AATCGGTGGTGGACGAGCTGCCGCTAGCTATCGTGCGGCGGGTGGTGAAAGAGAAGCTTTCGGAGTGTTCGCCGGATTATGACGTG
AGCATTCACAAGGAAGCGCTGCTTGCTTTCTCCGAGAGTGCCCGGATCTTCATCCACTACCTCTCCGCCACGGCAAATGATGTATG
TAAGGATTCAAGAAGACAGACGATGAAAGCTGAGGATGTGTTTAAGGCATTAGAAGACATGGAATTTTCAGAATTTTTGGAGCCGC
TTAAAGCTTCTCTTGAAGATTTTAAGAAGAAGAACGCTGGGAAAAAGGCTGCTAGTGGTGGTGGTGGTGGTGGAGCAGCAGCAGCA
GCTTCGAAGCCCAAAGAGACGAAAAAGAGGAAACATGAAGAAGAAGCATCAACGCAGAAGGGCGTGACAAAAAGCAAAAGAGATGA
GGGAGATTTGGAGAAGAATGTTGAGGATGACAACACAAAGGAGAATGAGGATGATAATACCGAAGAGAATGGGAATGATGATGAGG
AGGAGGAGGATGCTGCTGACGGGAATGAGGAAAACAGCATGGAAGAGAACGGGAATGAGGACAATAGCATGGAAGAAGCTGGGAGT
GAGAGTGGTGAAGATGATGAGAACGAAGGTACTGGCGAAGAGGAGGAGGATGAGTGAACTAAATTGGAGAGGCCGTTTCAGATTCT
TTTCTGCAAAGATGTTTTCAGGCTAATGTTCTCTCATTAAAATGTTAAAAATCGATTAGCTTGTTAAGCTTGAGTAGCACTGTTGT
AGTTGTTGGCATGTCCATGTCGTAGACTCGTATAATATTTGCTCTTTAACTCTAGTTTTACCAGATATTTAAGTGAAAGGTAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180316 nuclear factor Y, subunit B11 [Arabidopsis thaliana] | 719 | 9e-074 |
| XP_002880919 hypothetical protein ARALYDRAFT_481647 [Arabidopsis lyrata subsp. lyrata] | 716 | 2e-073 |
| XP_002275482 PREDICTED: hypothetical protein [Vitis vinifera] | 436 | 6e-041 |
| ACU14526 unknown [Glycine max] | 401 | 7e-037 |
| XP_002312821 predicted protein [Populus trichocarpa] | 395 | 4e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P13816 Glutamic acid-rich protein | 160 | 3e-010 |
| Q7M732 Retrotransposon-like protein 1 | 152 | 2e-009 |
| P48988 Major centromere autoantigen B | 145 | 2e-008 |
| Q54F38 Histone H3.v1 | 141 | 4e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZQH2 Putative CCAAT-binding transcription factor subunit | 719 | 7e-074 |
| C6SZ53 Putative uncharacterized protein | 401 | 5e-037 |
| A9PCR2 Predicted protein | 395 | 2e-036 |
| B9SCU4 DNA polymerase epsilon P17 subunit, putative | 370 | 2e-033 |
| D5ACV8 Putative uncharacterized protein | 334 | 3e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G27470.1 NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11); transcription factor | 750 | 1e-079 |
| AT4G14540.1 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | 156 | 7e-011 |
| AT2G38880.2 NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | 131 | 6e-008 |
| AT2G38880.3 NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | 131 | 6e-008 |
| AT2G38880.1 NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | 131 | 6e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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