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Information for unigene UN04428
| FASTA Sequence |
| Unigene ID: UN04428 | Length: 1138 |
SSR | | GTCATCAAACTATGTTGATTTTGATTTCCAATATTCATATTTCCAAAGGAAGATCTGGTCTGAAATATATGTAACGAGGTTTTTTC
TAATACATAGAAACACTCAAGTTTACAAAATGTGGGCAAGAGAGAATAAGTAAGTCCAAACTGGCTGTGGTATATGTAAATTTGTA
AGAAAAATCACGTCTTGCACGCCTTACTGTCACCACATGTCTCTACCCTATTTTTCTTTCTCGCTTCAAGAATAGCTTCTATAGGT
GGCCGCCCTGTGACCTGAAGTCGATACTTAGCCCAGAAATCATACACTGCATCAGCTACCTTCCCTATTGGTTCAAATTTAGTGAT
AGTGTAAACCCACCCAAGCCCAACCTCCTCATATAGTTTCCTAAATGCCTCCACACCCGTTACCACATTTCCATCGGACTGAATCG
CGTGGATTTGCCCCATAACCTAACACAAAACGCGATCAAATCCGAACCAGAACATTAAAAAGCAGAGGATGGTACAAACTAGAGGA
GGTTAAATAAATCAATTTACTGTTTTGTAATCAAGCCCTTGATTCTCTTGCGGGGAATAATCATTGGAACTGATGTCAACGAACTT
TATCGTTCCATTTTCCTCATTCCTTTCCTTAAGCATATTAACCTTTTTTTTTAAAAAAGAAAACGGAAACAGAACAATTCAGTTTG
AGCAAAGTAGTTTCAAGCTTCGCTATGTACAGTTGGGAGAGAGAGGTGCGTATTATTATGAAGACCTCACGCATACAGAGAGGGCA
ATCCCCATCGTAAAGCATTTTGATTTTCCAATTCTCAGGTTTTGGCTCGTCGTTGTTCTTCAATTGTGTAACGGGATCAACACTTG
CTCCTTGTATCGCCCTAATTTGATATCTAAACCCTACAAAGATAATCATATATATATATATATGCCAATTTCACTTCTTTAAATTT
TCGGTGGCGAACCCTAATTTGTTACCTTTTGGGATGATTTGAGGTTTGAAAACGGGATAGAAATGGTGTGATGATAGAGATCGAAG
AGAAGGGTTGCTTCCGTGCTTCCATATTACGAACGCAGCAGCAGCTCCTCGCGTTGCCATTTTTGTATTCTCTTCCAATTTTTTCT
CAAATGCAAAATGTGTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864035 hypothetical protein ARALYDRAFT_495066 [Arabidopsis lyrata subsp. lyrata] | 419 | 8e-039 |
| NP_568719 putative thiol-disulfide oxidoreductase DCC [Arabidopsis thaliana] | 415 | 2e-038 |
| XP_002283569 PREDICTED: hypothetical protein [Vitis vinifera] | 373 | 2e-033 |
| BAB10296 unnamed protein product [Arabidopsis thaliana] | 368 | 6e-033 |
| XP_002534285 conserved hypothetical protein [Ricinus communis] | 343 | 5e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W485 Uncharacterized protein At5g50100, mitochondrial | 415 | 1e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T7R6 Putative uncharacterized protein | 343 | 3e-030 |
| C6TMF4 Putative uncharacterized protein | 342 | 5e-030 |
| B9IEM6 Predicted protein (Fragment) | 340 | 8e-030 |
| Q8W437 PBng143 | 335 | 3e-029 |
| A2XYR8 Putative uncharacterized protein | 315 | 6e-027 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G50100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 598 Blast hits to 598 proteins in 152 species: Archae - 0; Bacteria - 266; Metazoa - 3; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). | 415 | 9e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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