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Information for unigene UN04432
| FASTA Sequence |
| Unigene ID: UN04432 | Length: 1246 |
SSR | | CACTTTCAAAACACACAGATAAAGGAGATCTTTAACAAAATATATTACAAGAGTCAAAGCAATAACACACTTTTAACGCACTCTGA
CACCCTCGAACCAAACCAAACTACTCCATATACTCCAAAACAAGAGACCCCATTAAGATCTCCAGATTGATGGTGAAAGCACTTCT
GCATGGTTTAGTGAGTTCTTGAAAATCATATCGCCAGCACTATGATAACAATCAGGAGTACGATACCAAAAATCACCATGAGCAAG
CACATCAGAGTAGAACTCGATCTTTGTGTCTTCGAAGCTTTTGCGAGATGAGATCTTCCTTGTGCCGTTGCAGCGTGGGAGTTATC
GATATGAGTGCTAATATCATCGATCATGGTGCCTTGATCATGTACCAAAACAGCCAAGTCTTTGAAGATCTCGTGCACCTCGCCAA
TTTGCTGCTGGATCTCTTGTATCCCTTGCTCTCTTTCCTCGATTATAGCTTCATTAAATACAATCTCATTGTCCAACAGTACAAGT
TCTTGTCTTTTGGATTCCACAAGAAGCGCACGCTGCTCTGGATGCTTATCTCCACTCACATCTATCTCACTGGATGTATAGCTATA
TTAACCAAAGCCAAGAACTCAATACACAAAACCACAAAAACAAAACATAAGCCATTTTCGATTACCTAGATGGAGGAGAAGGATTG
GTGAAAAGAGGAGCATAGACAGTTTCTCTTTCAGCAGCGAGACGCTGAGCTTTTTGAAACTCTTTCAATACAGATTGAAAGTCCTT
CGCAAGCTTAGCATCCACAATCTTCTTCCTTTGATCGACACCTCTTTGATGATCAGTTTCGCTAGCTTCTCTAAGTTTAACTGACG
TGTCTTTCACCAACTCTCCGATATGTAGTCTTGTCTTATGCAGCTTATCTCGGAGCTCCGGGGTGTCTTTGGGAGTACCGAGAGTG
TTGACCAGACGGTGGAAGCTAGAGACGGCTGTGTTGATCTGGAATACACCGGAAGCCACGGCTTGCGTCGTGTCTTGTCTCCCTCC
TCCTCCGTTGATGTAACTACTGGAAGAAGAAGCTAACGGTCTTCCTCCTCTTCCTGCCTCTAAATCCTGAAAACTCATTTTCCCTT
TCTTACTCGAGAAACCTCACTGCGAAAAAAGATTCGATCTTGACGGTAACGGAGATCGAGGGAGGAGCGAACGTGACGGTGAATTT
TCGATTCGGCGGCGGAATTCTCTCTCTCTCCGACAGGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD65159 syntaxin, putative [Brassica oleracea] | 664 | 3e-067 |
| D71447 probable syntaxin - Arabidopsis thaliana | 598 | 2e-059 |
| NP_567537 syntaxin-23 [Arabidopsis thaliana] | 589 | 2e-058 |
| ABD65611 syntaxin, putative [Brassica oleracea] | 589 | 2e-058 |
| NP_001078403 syntaxin-23 [Arabidopsis thaliana] | 589 | 2e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 589 | 6e-061 |
| AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 589 | 6e-061 |
| AT5G46860.1 VAM3; SNAP receptor | 493 | 9e-050 |
| AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor | 419 | 3e-041 |
| AT1G32270.1 ATSYP24; SNAP receptor/ protein binding | 336 | 1e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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