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Information for unigene UN04450

FASTA Sequence
Unigene ID: UN04450Length: 688 SSR 
ACATGGACAAGATTCTTAAAATTGTTACACACACACACACAACTTAGAAGCAAGCAAGATTGTCTTATCAGGAAAATGTAATACAT
TACATAAGTCAATTACATTACATATACTGAACTGGAGGCATGTAACAAACAAACTGTTTTTAACCAATTTGGCAGGCCTCCACTTC
AAATATTACAAACTGGGGTGTGACAAATTAGTCAGCGGTCCAGCTCTGTTCGACAATCTCCTTAACATGTCTGTTGTAAGAATGGC
AGCGACATCATAGATAGGACTCCACTGGTTCTGTAAGATATCGAGACAAATACTCCCATCTGCATAGATGTTTGGGTGAAACATGC
GAGAAACAAAACGAACAGTTGGTGGTTTGTTTGGATAATCCTCTGTGAATTGAAGAGTCAACTTAAAAGTACCTCCATCCCAAGGC
GTATCATCTGGACCAAAGATAACAGCGTTCCAGAGCAAGATGTTGTTGTCATGAGGAGCACCACTGATACCGGCAGGAGGATCTTG
CTGCAACCTCCTGAAATCCCTCATAAGCCTCTTCCTCGCTGGTGTTGACATCGTAAAATCTCAGAAGAGAGGGGAGACAAAGATTG
TCGGAAAGATTAAAGCTTTTAAATAAAAGAGAGTTAGGATTGATTGGGTCGCCGCGGTACCTTCAAAGGTGTCAACCTAACTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001146868 ubiquitin-conjugating enzyme E2-17 kDa [Zea mays]5852e-058
NP_001058973 Os07g0166800 [Oryza sativa Japonica Group]5824e-058
NP_001132525 hypothetical protein LOC100193988 [Zea mays]5824e-058
P25866 RecName: Full=Ubiquitin-conjugating enzyme E2 2; AltName: Full=Ubiquitin carrier protein 2; AltName: Full=Ubiquitin-conjugating enzyme E2-16 kDa; AltName: Full=Ubiquitin-protein ligase 25799e-058
NP_001051522 Os03g0791800 [Oryza sativa Japonica Group]5772e-057

Swiss-Prot top hits (Blast detail)Scoree value
P25866 Ubiquitin-conjugating enzyme E2 25794e-059
P25865 Ubiquitin-conjugating enzyme E2 15661e-057
P42745 Ubiquitin-conjugating enzyme E2 25661e-057
P35130 Ubiquitin-conjugating enzyme E2 25615e-057
P42746 Ubiquitin-conjugating enzyme E2 35266e-053

TrEMBL top hits (Blast detail)Scoree value
B6SGR7 Ubiquitin carrier protein5851e-058
B4FH08 Ubiquitin carrier protein5823e-058
B8B7L6 Ubiquitin carrier protein5823e-058
C5XAB9 Ubiquitin carrier protein5823e-058
Q7XIC8 Ubiquitin carrier protein5823e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase5661e-058
AT1G14400.2 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase5661e-058
AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase5661e-058
AT5G62540.1 UBC3 (ubiquitin-conjugating enzyme 3); ubiquitin-protein ligase5266e-054
AT4G27960.1 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase2839e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
81  33%
 
101  33%

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