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Information for unigene UN04471

FASTA Sequence
Unigene ID: UN04471Length: 971 SSR 
GATTGTCTGGATTGATAGTGGATGTGTTTGGAGATATAGCTGTGGTTGCATCCTCAGCTGCTTGGATTGAAAAGTACAGGAATCAT
GTGGAGGCTTGCTTGAGATCATCAGTCCATGGAATTAATCACATCAACTGGAGACCTTCTCTTGATCTCTCAAAGAAGATGGCTTT
GATATCTCCTCTTTAAACTAACACAATCATCATCATCATCATCTCCTCCTCTCCCCGAGAGATCAATGGTGGTGGAAAATGGAATC
ACTTACGCAATCTCGCTAGAGGGACAGAAGACAGGGTTCTACACCGATCAACGCGAAAACCGTCACTTCATATCAACCATCTCCGC
TGGCAAAAGAGTTCTTGATCTCTGCTGCTATAGTGGTGGTTTCGCACTTAATGCTGCCAGAGGAGGTGCTACCAGTGTCCTCGGGA
TTGATTCATCTTTACCTGCTTTGGAGCTGGCCAGAGAGAATGTAATCCTCAACCATATGGATCCAGGGAAGGTTGTTTTCTTCAAA
CAAGATTCTACAGAATTCATGAAGGGTGCTCTGTCAAGGGAAGAGACTTGGGACATTGTCATCCTTGACCCTCCTAAGCTAGCTCC
AAGGAAAAAGGTTTTACATAACGCGGCAGGAATGTACAGAAATCTCAACTCGTTGGCAATGAGATTGACAAGTAGTGGAGGTTTGT
TGATGACATGCTCATGTTCAGGTGCCATGACACAGAGTGGAAAGTTCTTGGGCATTCTTCAGAGCGCTGCAGCAATGGCTGGGAGG
AAGATAACTGTGGTTAGGGAAGCTGGAGCTGCTTCTGATCACCCACTTGACCCATCCTACCCTCAAGGCCACTATCTCTCCAATAT
TCTCCTTCGGGTCCTCTGAGTTTTGGTTTCAACAATAGCTCAATTTTTTTATTTTTAATGTTGGTTGGGGACCAAAGTAATTTAAG
TTTGAAACAAGAAGAAAAGTTTAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891882 RNA binding protein [Arabidopsis lyrata subsp. lyrata]10764e-115
NP_974023 S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana]10747e-115
XP_002315078 predicted protein [Populus trichocarpa]9026e-095
XP_002265047 PREDICTED: hypothetical protein [Vitis vinifera]8812e-092
CBI24149 unnamed protein product [Vitis vinifera]8784e-092

Swiss-Prot top hits (Blast detail)Scoree value
A4SML8 Ribosomal RNA large subunit methyltransferase I4183e-040
Q12JE5 Ribosomal RNA large subunit methyltransferase I4175e-040
C4L7I7 Ribosomal RNA large subunit methyltransferase I4158e-040
A0KKF0 Ribosomal RNA large subunit methyltransferase I4122e-039
Q07VV2 Ribosomal RNA large subunit methyltransferase I4122e-039

TrEMBL top hits (Blast detail)Scoree value
B9HYB4 Predicted protein9024e-095
B9F3B5 Putative uncharacterized protein8102e-084
Q6H512 Os02g0173700 protein8102e-084
A2X1G1 Putative uncharacterized protein8092e-084
C0PB69 Putative uncharacterized protein8049e-084

Arabidopsis top hits (Blast detail)Scoree value
AT1G54310.2 RNA binding10752e-117
AT1G54310.1 RNA binding2203e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  60%
 
91  20%
 
111  20%

Unigene MembersMember information