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Information for unigene UN04479

FASTA Sequence
Unigene ID: UN04479Length: 2062 SSR 
GGAAGATTGGGTTTGCTCTCTGTATAATCGTCGTCTCATTGGGCGATACCTCCTTTTCTCCTTTCTCATCTTTCTGACATCCCCAA
AGAGAGAAGAAAAGGCTTTCTGCCGCCTTTTTCTTCCAAGAAAATAACCACCCAAAACAGAATTCAAAGGTTGAGTCTTCAAACTG
GGAAAGCCATGTCTCATATGGTGTTTCAGAGCAGCGTCGTCGCTCCAAAACCCTTATCTCCACTCAAACCCTCTTTACCCATCCCT
CCTCGCCCTATCTCCACTCTCCCTTGTAAGCTCCGTCGTAGCGGCTGCTTCATCAGAGCTTCCTCCTCCTCTTCTCTTATCGATTC
CGTCGGAGATTCAGTCTCAGGTCTCGAACGCTGCTTACAGCTGCAATTCAGCGGCGAGTTAGGTACTTCTTCTTCGTCTGGAAGTG
CGCAGATGCGTCCGGAGATGAAAGGTGGGAAGTTTGGTTCGGCAGCAGCTGTTACCTTGGAAAAAGGAAAACTTGATATGACCCAG
AAGAAAGTCGAGTCTACCCCTGAGATTGCAACTGGAGGAGGTGGTGGAGACATTGGAAAGAGTGCCAATTTCGGTGGTGGCGACGG
AGGTGACGATGATGGTGATGATGATGATTACTTTGACGATTTTGATGATGATGATGATGGAGATGAAGGTGGTCTTTTCAGGCGTA
GGATGTTCCTCGCTGAGCTTTTTGATAGGAAGTTCGTTGACGCTGTGTTGAACGAGTGGCAAAAGACAATGCTGGATTTGCCTGCT
GGCCTCCGCCAAGCATATGAAATGGGTTTGGTCAGCTCAGCACAAATGGTTAAGTTCCTTGCTATTAATGCTCGTCCTACAACAAC
TAGATTCATCTCTCGTGCTCTTCCTCAGGGATTGTCAAGGGCCTTTGTTGGCAGGATGTTGGCGGATCCTTCCTTTCTCTATAGAC
TTCTCTTGGAGCAAGCTGCCACTGTTGGATGCTCGGTTTGGTGGGAAGTGAAGACTCGCAAGGAAAGAATAAAAGAGGAATGGGAT
CTTGCGCTCATAAATGTGCTTACCGTATCAGCATGCAATGCAGCTGCTGTTTGGTTGCTGGCTCCATGTCGTTCCTACGGAAACAC
GTTCCGGTTTGACCTTCAAAATACGCTGCAGAAGCTACCAAATAACGTGTTCGAGATGAGCTATCCTCTTAGAGAGTTCGACTTGC
AGAAGAGGATCCATTCTCTTTTCTACAAGGCCGCAGAGCTATCCATTCTTGGAGTCGCAACGGGAACTCTCCAGGGCTCGTTGTCA
AACTTTCTGGCCGCAAAGAAGAAAAACAGAGTATCTGTGACAGTCCCATCAATCACCACAAACGCTCTTGGTTATGGTGCATTCCT
TGGTTTATACGCAAACCTGAGATATCAGCTTTTATGTGGATTTGAAAGAGCAATGAGCAACCACTTTGATGTCATTGGAGTAGCAC
TCTTCTTTGGCACTGCCGTGAGGATTATGAACGTTCAGTTAGGGGAAAGATCAAGACAAGTATGGCTAGGTGTGGAGGCAGACCCG
CTGGCTCAGTCCGATGATCTGCTGGCGAAAGCATACAACCGACCCTCAGAGGAAACGGCAGCAAAGCCAGAGTCAAGATGGTTCAT
CTCAAAGAATGCAATAGTCTCAGGGCTACTTGGTATGAAGCAACAGGACTCAGCTTCAGATTCTCCACCTCCAAAGGCTAGGCGAA
AGAGGATTGTACGGAAGAAGGTGGCTGCCTCTTAACTAACAACCTCTAAAAATTGTTCACAATTTTCGGAGCCCCGTGGAAGAGAA
ACAATGAAGTTGTGTTGTCACTAAGTTTTGTTGCCAGAAGGAATCACCAAACTGCGAGAGATGGGTAAGAAAAATTCTAAAGCGCT
TTTTTTTTTCTTCTTTATGACTATCTCTCAAAAGTCCTTCAATTTCTTTTGAGATAAGACATTTATATTCTTAGGTGTTGTGATTT
TATATCTGCTCAGATCTCAAAATTTGTCATTCTGTAACTTTCTCAGACCTTTTTTGCTAATAAATAGCCACATCTTTTATATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197857 uncharacterized protein [Arabidopsis thaliana]22722e-253
BAF01744 hypothetical protein [Arabidopsis thaliana]22687e-253
BAF02139 hypothetical protein [Arabidopsis thaliana]22687e-253
BAF01720 hypothetical protein [Arabidopsis thaliana]22661e-252
BAF02072 hypothetical protein [Arabidopsis thaliana]22652e-252

Swiss-Prot top hits (Blast detail)Scoree value
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571356e-007
P04929 Histidine-rich glycoprotein1312e-006

TrEMBL top hits (Blast detail)Scoree value
Q93W02 AT5g24690/MXC17_822722e-253
Q0WL68 Putative uncharacterized protein At5g2469022685e-253
Q0WMB2 Putative uncharacterized protein At5g2469022685e-253
Q0WMD6 Putative uncharacterized protein At5g2469022668e-253
Q0WLD5 Putative uncharacterized protein At5g2469022651e-252

Arabidopsis top hits (Blast detail)Scoree value
AT5G24690.1 INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RER1 (RETICULATA-RELATED 1) (TAIR:AT5G22790.1); Has 251 Blast hits to 242 proteins in 37 species: Archae - 0; Bacteria - 8; Metazoa - 20; Fungi - 4; Plants - 172; Viruses - 3; Other Eukaryotes - 44 (source: NCBI BLink).22728e-256
AT5G22790.1 RER1 (RETICULATA-RELATED 1)2995e-027
AT2G40400.1 unknown protein1884e-014
AT2G40400.2 unknown protein1884e-014
AT3G56140.1 unknown protein1841e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  22%
 
82  22%
 
192  22%
 
92  22%
 
111  11%

Unigene MembersMember information