 |
Information for unigene UN04487
| FASTA Sequence |
| Unigene ID: UN04487 | Length: 1012 |
SSR | | GGAGACTCAAATGTGTGGTTGGTAATGCAGACCATCTTTGATGATCATCCACTTCACTTCTGTATTCTATAATCATCAAACCTTTA
GTGATGATGGCAGCTCCCTTAGTGTTTTCGTTGAGAATTTCATCTACTCCTCATCATGGGATCAATCGAAATTTTCAACCTTTTCT
CCTAACCCAAACAGGAGCTCCTCCTAGATATCGTGCTCTTCGTTGCCAAGCAAACTCTGAATCTTCCGAACCCAAGGAGAAATTGG
TGGTAGATAATGGCTCTACTAGTGAAATTTCACCTGCGTCCAAAGTCACGGAACCATCACCTTCTTCTTCTTCTTCTGCGTTTCCT
GAATCTCCAAACAGTGATATTAACAGAAGAGTCGCTGTTGGTTCTGTTGTTGCCGCTTTGGCCTTGTTTCTATCGACAAGGCTTGA
TTTTGGGATCTCCTTGAAGGATTTAACTGCTTCAGCCTTGCCTTACGAGGAGGCTTTGTCGAATGGGAAGCCGACAGTGGTTGAGT
TCTATGCTGATTGGTGTGAGGTTTGTCGAGAACTAGCCCCTGATGTTTACAAAATCGAGCAACAATACAAGGACAAAGTGAACTTT
GTGATGCTAAATGTGGACAACACGAAATGGGAGCAAGAGCTGGATGAGTTTGGTGTTGAAGGTATTCCTCATTTCGCTTTCCTCGA
TCGACAAGGGAACGAGGAAGGTAATGTGGTCGGAAGGCTCCCGAGGCAGTATCTAGTTGAGAATGTCAATGCCCTTGCAGCCGGAA
AGCAATCAATTCCTCATGCTCGAGCCGTGGGACAGTACAGCAGCGCTGAAGCCCGCAAGGTTCATCAGGTTACCGATCCCTTAAGC
CATGGATAGAGAGAGACATCACAAACTCTATAGTGCACAAAAGTAGACAGTAAGGGGAACAACTGAAAAGTAGCAATGTTTCATAT
TTGATCAAATTGTAACTAAATGTTTGGTTTCGTTTTATTACATAATAACTTATAAAACTCTAAATC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195437 thioredoxin-like protein HCF164 [Arabidopsis thaliana] | 1045 | 2e-111 |
| XP_002869014 HCF164 [Arabidopsis lyrata subsp. lyrata] | 1032 | 5e-110 |
| XP_002522379 Thiol:disulfide interchange protein txlA, putative [Ricinus communis] | 816 | 6e-085 |
| XP_002310771 predicted protein [Populus trichocarpa] | 815 | 8e-085 |
| CBI38364 unnamed protein product [Vitis vinifera] | 815 | 8e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23166 Thioredoxin-like protein HCF164, chloroplastic | 1045 | 7e-113 |
| Q7Y0D4 Thioredoxin-like protein HCF164, chloroplastic | 771 | 4e-081 |
| P73920 Thiol:disulfide interchange protein txlA homolog | 337 | 9e-031 |
| P35088 Thiol:disulfide interchange protein txlA | 310 | 1e-027 |
| P23400 Thioredoxin M-type, chloroplastic | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S8R0 Thiol:disulfide interchange protein txlA, putative | 816 | 4e-085 |
| B9HEG9 Predicted protein | 815 | 5e-085 |
| B6UAV4 Thiol disulfide interchange protein txlA | 740 | 3e-076 |
| B8ANT8 Putative uncharacterized protein | 647 | 2e-065 |
| B9F5W3 Putative uncharacterized protein | 647 | 2e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37200.1 HCF164; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 1046 | 5e-114 |
| AT1G21750.1 ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase | 124 | 4e-007 |
| AT1G21750.2 ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase | 124 | 4e-007 |
| AT2G47470.2 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 124 | 4e-007 |
| AT2G47470.1 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 124 | 4e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
