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Information for unigene UN04496
| FASTA Sequence |
| Unigene ID: UN04496 | Length: 1540 |
SSR | | GGGTTTCTCTCTTTCTGTCTCTCTCTCTCTCTCTGAATAATCTGTTCTACACAATACAGCTCAAGAAGCCATTTTTTATGGTCAGA
AAAGGCAAAGCAAGCCTTATTCTTCGTTTGCTTCCATTCTCTACTAATGGGTTCTTGCCTCAGCTCTCGTGTTGACCATAAGAGCA
GTAGTCTCGACGCCCTGAGTTATCAATCATCATCCTCACCGGCGGCTGATAAGAGAGAAGGAGAGATACTTAGCAAAGCCAACGTT
AAGAGCTTCACCTTCAACGAACTAAAACTCGCAACGAGAAACTTCAGATCGGACTCTGTTGTCGGAGAAGGCGGTTTCGGTTCTGT
CTATAGAGGTTGGATCGATCAGACAACTCTGGTTCCAACTAAATCTAGTAACGGTCTTGTAGTTGCTGTTAAGCGTCTTAACCCTG
ATGGCTTTCAAGGTCACCGAGAATGGCTGACAGAGATCAACTACTTGGGCCAGTTAAGTCACCCGAACTTAGTTAAACTGATTGGT
TATTGCTTGGAAGATGAGCAACGGCTTCTTGTGTATGAGTTTATGCACAAGGGTAGTCTTGAAGATCATCTCTTCACAAATGGTGT
GAAGTGTAAACCGCTCTCTTGGCTATTACGGGTTAAGGTTGCACTTGATGCAGCTAAGGGGCTTGCGTTTCTTCATAGTGACCCTG
TTAAAGTCATATACAGAGACATCAAGGCCTCAAACATCTTGCTCGACTCGGACTTCAATGGGAAACTTTCAGATTTTGGGCTAGCA
AGAGACGGTCCAATGGGAGAAACAAGCTATGTTAGTACAAGGGTCATGGGTACATTTGGCTATGCTGCTCCTGAGTATGTGTCAAC
AGGTCACTTGAATGCTAAAAGTGATGTGTACAGTTTTGGGGTAGTGCTTCTAGAAATACTCTCTGGAAGGCAAGCATTGGACCATA
GCCTACCGACCAAGGAGCAAAACCTTGTGGACTGGGTACGACCATACCTCACAAGCAAGCGAAAAGTTCTACTAATGGTGGACACT
CGTCTTAAGTCACAGTACAAACCCGAAGAGGCAGTGAGAATGGCAAGCATTGCTGTGCAGTGCATCTCATCTGAACCAAAGTCACG
ACCAACCATGGACCAAGTGGTCCGAGCCTTGATGCAACTGCAGGCAAGCATGGTTACCGGCTAAAGTTGACACAAGTAAAGATATC
AAAAGACTTGTGGGATTGTAGTAGGTATATAAAGATGTGGTTGCTGACTGTGGCTAGGTCTCATGTCTCCTCGTGTGGTGTAAGAT
TCCATTTTCTTCCACGAAACAAACACTTAGGCTACATGACATGTTTTGAAAGATGTGTTCACAATACTTTTTCTTTCAAAACTCCG
TATTGTATCCAATGTCTGCTTATAGATTTTTTTTCTAGGAAATATTTGGAGTATTCTCTGTAATATCTATATTATCAAAAGAGAAG
TACCCATATAAATTGCTCCTAAGTTTTCAATGTTATTTACACTACTATGCCACTGAGAATTAAATAAGTTTCCTATTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879808 botrytis-induced kinase1 [Arabidopsis lyrata subsp. lyrata] | 1386 | 9e-151 |
| NP_181496 serine/threonine-protein kinase BIK1 [Arabidopsis thaliana] | 1376 | 1e-149 |
| XP_002534306 Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis] | 1178 | 1e-126 |
| NP_001045548 Os01g0973500 [Oryza sativa Japonica Group] | 1176 | 2e-126 |
| EEC72262 hypothetical protein OsI_05407 [Oryza sativa Indica Group] | 1173 | 4e-126 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H186 Probable receptor-like protein kinase At3g55450 | 1517 | 2e-167 |
| O48814 Serine/threonine-protein kinase BIK1 | 1376 | 5e-151 |
| P43293 Probable serine/threonine-protein kinase NAK | 1138 | 2e-123 |
| P46573 Protein kinase APK1B, chloroplastic | 1110 | 4e-120 |
| Q06548 Protein kinase APK1A, chloroplastic | 1104 | 2e-119 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T7T7 Protein kinase APK1B, chloroplast, putative | 1178 | 8e-127 |
| Q5JM84 Os01g0973500 protein | 1176 | 1e-126 |
| B8A9X9 Putative uncharacterized protein | 1173 | 3e-126 |
| B9T4H9 Protein kinase APK1B, chloroplast, putative | 1171 | 5e-126 |
| B8AWZ2 Putative uncharacterized protein | 1166 | 2e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G55450.1 protein kinase, putative | 1517 | 2e-168 |
| AT2G39660.1 BIK1 (BOTRYTIS-INDUCED KINASE1); kinase | 1376 | 5e-152 |
| AT5G02290.1 NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 1138 | 2e-124 |
| AT5G02290.2 NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 1138 | 2e-124 |
| AT2G28930.1 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 1126 | 5e-123 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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