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Information for unigene UN04550

FASTA Sequence
Unigene ID: UN04550Length: 1603 SSR 
ATCAAAACTGATGACATAATAAAGGTACAAAAATATGATCCACCAAGCAGAAAATATTTCAAACAACAAAATCTCACAAGAGTAAA
ATCCCCCTCAAACCCTCCTTTACAGTCACAGTGTCTTCGCCAAAAAAAAAAAACTGAATAATGCCTTTTTTGCGCAACATATTCTT
AATCTTACACCCATTTTTTTTAGTTCTCAGCTTCAAGAAACAGGCTGAGTTCCACATACCTCTCCTGCGAAGAAGACCTGGAGTCT
CTCCGACCTCTCAAGCTCAAGCTATCATCGGTCTGTGGTCCAAGCAACAGAGCACCACTCCTTTCCTCCGCCACAGTCCTATCGTC
CTCGTCCACATCCCTTAGACCCCTCAACGCCATGGAATCCGAGATAGGGAAGTAGACAAGCAAGCAGATGGAAACCACGGACAAGC
AGAAGAGGGAGGAGAAGGCCAAGAAAGAAAGGGCTTCGAACAGGACCGTATCCACCTTGGTTAGTACCGACAAACAGAGCATAACA
ATCCTCAGCGGAAGGAAACACGAGACGGAGAATATCAAAGTGTACACTCTCTTCTGCAGACGCTTATTAATCACAAGTTTCAGTAT
CCGCCTCCCGAGCCAGAACAAGTAAGCTGTTAACACGGCCGCGAACACGCCGAGGACGACTGTACTCAGCAGAGGGTAAGTACACA
ACGCAACCTCCTCCTCGTCCCCATCCATAATAACTCGGGAGTAGGTTCTCGTGAAGTTGCGCGGGAGGTCCACGTAAGAGCCGCTA
CCACCGTTTAGGCGGGACTCGGACAGAACAATCGCGAGCTGGAGGGCAAACACGGGGAGACAGCAGAGAAAGATGTAAAAGGCAGT
GTTCCTGTTCCATCTCCCGCTCAGCGCCCCAGACTCCATCTTCAGAGGAGCTCGCAGGAGAAACACGAGGGCGAGAAACAAGCAAG
GCTCCGCAAAACCTAGATTCGAGACGATGTACCACTTGCAGACGTTCTCTTGCCATCTGAGATCCAACCCGCTAAGTATCCTCCTG
TGACGCCTGAACAAACTCAACCGGAGAATCTCTCCGATGGCCCAGCAGATAGAGAAGAGGATGAAAGCGATCCGGATGATCCAGGG
ACCGCTGAAGTAACCGAGCTGGAGAAACCTTTGATTACGAACGTGAGACTGGAAGTAGAGAGAGTAAGCGATGCAGAGGAGACCGA
GGAGGGTGAGAAGAAGGACGAGAGAGATGGTCACAACCCCGAATGCATCGGGAACTAATTTGGTCAGGGGCATCACCCAAAACACA
GTATCCACGCATGCTCTCTAACAGCATGGGTGCCTGTAGCCGCCACTAGATGATAACAAGCCTCCTTGTCTCCAAAACAATGCGAA
GCTATGAAACACCCACATTCACTCGCATCAGCTGCAGCCCAGATCACCCGATTATAAACTTTTGTTGATCTTTTGACTCTTTAGCA
CCACTTGTTTATGCGTCTTACCTACATAAAAAGGAGGAGAATCTGGATCCACAAAAGAGTTAGAACGGGGAAGATCTGAGCAGCGG
CGGAGAAAAGAGAGAGAGAGAAATAGATAGAGATTGAGAGGGGGAATGAGACCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176081 uncharacterized protein [Arabidopsis thaliana]15428e-169
XP_002894681 hypothetical protein ARALYDRAFT_474854 [Arabidopsis lyrata subsp. lyrata]15302e-167
XP_002265141 PREDICTED: hypothetical protein [Vitis vinifera]10373e-110
XP_002528841 conserved hypothetical protein [Ricinus communis]9943e-105
XP_002331087 predicted protein [Populus trichocarpa]9541e-100

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FVT5 Putative uncharacterized protein At1g5768015425e-169
B9SS72 Putative uncharacterized protein9942e-105
B9N7A2 Predicted protein (Fragment)9548e-101
B9N0G4 Predicted protein9377e-099
Q1SKU3 Putative uncharacterized protein9271e-097

Arabidopsis top hits (Blast detail)Scoree value
AT1G57680.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).15432e-171
AT1G57680.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).15432e-171

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
215  50%
 
102  20%
 
72  20%
 
201  10%

Unigene MembersMember information