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Information for unigene UN04555

FASTA Sequence
Unigene ID: UN04555Length: 792 SSR 
CAAGTAGGGTTGATCCTTAAAAATACTAAAATCATCCATACACAACAAATAATGGAACACCAAAGGAAAGCGACTAGTAGGAGAGG
AGGGGTTAAAGAGCTGCTGCCACTAGTTAATACCATCGACGAAAAAGAGTTACAGTCACATTCACCATCAACCTTAGTGAAAGTAA
GCAGGAGGAGGAGCCTGGTACTGATAGCAGTTCCCGTAGAAGTTCCCATGAGCAGCAGCAGCTGGACTGAAAGTATAAGTCTGAGG
AGGTTGTGCTGCCATGATTGGACCGCTAAGGAACGGTCTGTTGTCATACACATACTGAGGATACCTCTCAGGTATCACTCTACCAT
ATCCAGTCTTGCTGTTATTGTTGTTGTTGTTGTTGTTGTCAGTGGCCCGGGGTTGAGGACCACGTGGTCGCTTTGTCTGAACCTTT
GTGGGTTCTGTTGCCCTCTTTTTCTCAGCTTTGGCCTTCTCCAGCTGGAGAATCCTTTTGTGAAGTGGCTCAACTGGGTACTGCTC
TTCCAGGTTATGCTCTTCCACACACTTTATCACAGCCTTCAGACCAGTAAGCTCCCTCTCATTGAACTCATCCTGAACAGCAGGAG
ATGCATTTCCAGATCTGCCTTGAGAGGAAGATCTACTTGCCTCAGTCAAGTAACATTTAAGTAACTCAACAGGTGGGAACTCTTCT
GTGAGTCCAAACGCAAATGCCAAGTTCACAGCATCAATCTGTTTACCACTGTTCACCAGAACTTCAATCACACCAGGCATTTTTTC
AGACAATCCAAGAGAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850923 FRIGIDA-like protein [Arabidopsis thaliana]9186e-097
AAM96992 putative protein [Arabidopsis thaliana]9142e-096
CAN80762 hypothetical protein VITISV_014605 [Vitis vinifera]5961e-059
CBI23332 unnamed protein product [Vitis vinifera]5961e-059
XP_002320559 predicted protein [Populus trichocarpa]5881e-058

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67ZB3 Putative uncharacterized protein At5g483909184e-097
Q8L7D6 Putative uncharacterized protein At5g483909141e-096
A5B440 Putative uncharacterized protein5969e-060
A9PER9 Putative uncharacterized protein5904e-059
B9IB06 Predicted protein5887e-059

Arabidopsis top hits (Blast detail)Scoree value
AT5G48385.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 987 Blast hits to 921 proteins in 78 species: Archae - 0; Bacteria - 16; Metazoa - 58; Fungi - 7; Plants - 873; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).9192e-099
AT3G22440.1 hydroxyproline-rich glycoprotein family protein2831e-025
AT4G14900.1 hydroxyproline-rich glycoprotein family protein2713e-024
AT1G31814.1 FRL2 (FRIGIDA LIKE 2)1942e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information