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Information for unigene UN04560

FASTA Sequence
Unigene ID: UN04560Length: 641 SSR 
ACTAATAATACTTATAATAATAATAATAATAATAATAACCTCATTAAGAAGTTCTTTCTTAGTTGCTTTTGTAGAAACTCTTGTTG
TTTCAACAACCTTTGACAAGATGAGGGACACAAATAGGGAAGATGTACTTTGGTTTTCTTTGTTTTGATCTTCTCCATGAGAAGCA
TCTACCTCCTCTCTTCTTCTGCTTCTTCATTTTTTCCTCTTCTTCTTCTTTGATACTCATCTCTTGCTTCTCTTCTTCTTCTTTCT
TATTACTCATCTCTTGCTTCTCTTCTTTTTCTTCGCCTTCTTTAATACTCACCTCTCGCTTCTCATCTGTTTCTTCTCCTTCTTTA
CTCGTTTCTTGCTTCTCTTCTTCTTTCTCTTCTTCTTCTAACTTCAAATCCTCTTGTTGACCTTCTAGTTTGAGAGTAAAATCCAC
TGGCGTATCATTATCCTTCACGTGTCGTTTCAGTGACCGTTCCATGATCGTAGGCGTCTTTGCCGGACTAGGGCTACCGGAGTTAA
GATCCACCGACGTACTCTGAATGCCCACATCTTGTTTCAGCCCCACAACTTTCTTTTCTCGAACAATAACAGGATCAGGAGCATAA
AGATCCTCGTGGATAACTCTAACGTTGGGATTATCATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871700 predicted protein [Arabidopsis lyrata subsp. lyrata]4292e-040
NP_568324 uncharacterized protein [Arabidopsis thaliana]4183e-039
NP_001031889 uncharacterized protein [Arabidopsis thaliana]4183e-039
AAM64500 putative protein with poly glutamic acid stretch [Arabidopsis thaliana]4103e-038
NP_001119233 uncharacterized protein [Arabidopsis thaliana]3512e-031

Swiss-Prot top hits (Blast detail)Scoree value
Q55FI4 Nucleolar protein 581734e-012
Q54F38 Histone H3.v11592e-010
P54696 Myosin-H heavy chain1555e-010
Q54J55 Myb-like protein X1521e-009
Q9EPQ2 X-linked retinitis pigmentosa GTPase regulator-interacting protein 11521e-009

TrEMBL top hits (Blast detail)Scoree value
Q8RWE0 Putative uncharacterized protein At5g160304182e-039
Q9LFS1 Putative uncharacterized protein F1N13_1704182e-039
Q8LBX5 Putative uncharacterized protein4102e-038
B3H6N4 Uncharacterized protein At5g16030.33511e-031
Q1KUN0 Putative uncharacterized protein2921e-024

Arabidopsis top hits (Blast detail)Scoree value
AT5G16030.1 unknown protein5822e-060
AT5G16030.2 unknown protein5822e-060
AT5G16030.3 unknown protein5785e-060
AT3G02500.1 unknown protein2443e-021
AT5G03710.1 unknown protein1555e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
71  50%

Unigene MembersMember information