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Information for unigene UN04592
| FASTA Sequence |
| Unigene ID: UN04592 | Length: 1399 |
SSR | | GACCTAAACTCTAAAATATGTATATCTTCAGAATACAAATATATTACAAATACTGTAGATAGTTTTTTGCTTCTTTTTTTTGTTTT
TCTTAAATGAGATAAAAATCCGACCGGGGAATCTTAAAAAGGAGAAAATAGATCCAGTGACTGGCTAAGGAAAGGGAGAGAAACAA
AAAAAAAAAAAAAGGAGAGAACGTAAACCAAAACAGAGGGTTGCGGGTTCGTTCACATCCTTCCCAAGAAAAAAAATAAAAGACAA
CACATCATATCACCATCGGTTAATTACTCTCGTCCATGATTATATGGATTTTCCGGCTGGTATGGAGGAGGCGGCATGTAAACCAT
TTGCGGCCTAGGCTGACGACCCATCATCATTTGCTGCTGCTGTTGCTGCGGAAACTGGGGTTGTGCATTTGGGGGATAGAAGGCTT
GAGGATGCTGGTGGCCTGGATAATAAATCACCTGCTGCTGTCCTGGATATTGCGGTTGAATTCCGTAACCAAGAGGCATTCCAGGC
ATCTGCTGAACAGCTGCAGGTGCAGCAGGGTAGTAGAATGATGCATCTGCCATTGGAGGCTGAGGTCGCGCAGCAGCTGTTGGTTT
GAAACTCTTTGGTTTGGATTCAGTTTGAATTCCTTTGCATTCGGATTAAGAGTGGACTTTTCAGATGATGACAAAGAACCAATTGA
TGAGCTTGGTGATAGTCCAGGACGACTTGATGTTGAAGGACCTGGGCGGCTCTCTGTGCTTCTTCTTGAAGCCGACCCAGTAAAGC
TTTCAGGTTTTGGTTTACCAGAAACTTCACTGACTTGCCTTTCTTTCTCAGCAACAGTCTTCCACGCCGAGGTTCCACTACCACCA
CCACCACCACCAAGTTTTGCACCTTCTTTGGTATCTCCATGACCCAGAAACTGATTCCTCAGCTGATCTGTTACTGTGGGAAAACT
CTGGATTATTCTTGTTTCTTCGCTCACCCAACTGGCTCTCACTGATACTGCTGCCTGAGGCAGTAAAATCTTTGGATCGCTGTTCA
GAGGGAAGGTGCTGAGCATGATCATCGGATATGGAGCAGTTTTGATCTACATTTGTATTATTCCGAGAAGGCTGACTGGCATCCCG
TAATTCTTCATATCCCTTGCCACTAGAAGAAGCTGGCTTCTGGACAGTAGAAGAAGATGACCCCAAAAGTCTCATCGTTGCAAGTG
TCCAGCAATTCGTCGTCCTCCTCATCAAACCCACTATCATCAAATGCATCAGCTGGAAGGACAGCTGAGTATTTAGATTCCTCGTC
AATATCAAATTTCTCATTAAGCTGAAAGCCTCTTTCCTCTGCTACATGAAGATCTCGGGTATTTTCACCCTCAATCTCTCTCGCGA
TTCTCTGAGCTCTCTCTTCCATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882865 hypothetical protein ARALYDRAFT_897659 [Arabidopsis lyrata subsp. lyrata] | 344 | 5e-030 |
| BAB02332 unnamed protein product [Arabidopsis thaliana] | 331 | 2e-028 |
| NP_566471 CTC-interacting domain 4 protein [Arabidopsis thaliana] | 331 | 2e-028 |
| NP_001189886 CTC-interacting domain 4 protein [Arabidopsis thaliana] | 331 | 2e-028 |
| XP_002894481 ctc-interacting domain 3 [Arabidopsis lyrata subsp. lyrata] | 253 | 2e-019 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94AM9 Putative uncharacterized protein At3g14010 | 331 | 1e-028 |
| Q9LVJ8 Genomic DNA, chromosome 3, P1 clone: MDC16 | 331 | 1e-028 |
| Q8L793 Putative uncharacterized protein At1g54170 | 241 | 3e-018 |
| Q9SYH5 F15I1.27 | 241 | 3e-018 |
| B9GKW4 Predicted protein | 225 | 2e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14010.1 CID4 (CTC-Interacting Domain 4); protein binding | 331 | 6e-031 |
| AT3G14010.2 CID4 (CTC-Interacting Domain 4); protein binding | 331 | 6e-031 |
| AT3G14010.3 CID4 (CTC-Interacting Domain 4); protein binding | 331 | 6e-031 |
| AT1G54170.1 CID3 (CTC-Interacting Domain 3) | 241 | 2e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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