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Information for unigene UN04664

FASTA Sequence
Unigene ID: UN04664Length: 845 SSR 
GGGTCCTCCTCCGCCACACCCAAAAGGTAAAAAAGAAAAAAATGGTGTCTCTGAAGCCCCAGAAGCGGCTGGCCGCGTCGGTGATG
GAGTGCGGGAAGGGCAAAGTTTGGCTCGATCCGAATGAAACCGCCGATATCTCCATGGCCAATTCCCGGCAAAACATCAGGAAGCT
TGTGAACGATGGTTTCATCATCAAGAAACCAACAAAGATCCACTCTCGCTCCAGAGCGCGTCGTATGAAGATTGCCAAGATGAAGG
GTCGTCACTCTGGTTACGGTAAGAGTAAGGGTACCCGTGAAGCTAGGTTGCCGACTAAGGTACTGTGGATGCGTAGGATGCGTGTC
CTAAGGCGTCTTCTGAAGAAGTACAGGGAGTCTAAGAAGATTGACAAGCACATGTACCATGACATGTACATGCGTGTTAAGGGTAA
CGTCTTCAAGAACAAGCGTGTCTTGATGGAGAGCATCCACAAGTCCAAGGCCGAGAAGGCTAGAGAGAAGACTTTGTCTGATCAGT
TTGAGGCTAAGAGGGCTAAGAACAAGGCTAGCCGTGAGAGGAAACATGCTAGGAGAGAAGAGCGTTTAGCTAAGGGTCCTGGAGGA
GATGTTGCACCTACAACTTCACCTCCAGCTGCTGCTGCTGCTACTACTACTGCTCAAACTGCAGAGGTACCAAAGAAGAAGTCCAA
GAAGTGAAGAGGATATAGTGATCATCAATCTATATAATTCATTTCACTTGACTTGAGTTTTTGATGTTTTATGAAGTTTGTTTTGT
TGAAATACTTTCTTTTCCCGATAAACACAAGTTATGTCAGTTATTTGGTGTTATGCTTTCACATTTTAAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_171777 60S ribosomal protein L19-1 [Arabidopsis thaliana]9804e-104
XP_002892123 EMB2386 [Arabidopsis lyrata subsp. lyrata]9796e-104
AAL58923 At1g02780/T14P4_3 [Arabidopsis thaliana]9681e-102
ACJ84183 unknown [Medicago truncatula]9114e-096
ABK93587 unknown [Populus trichocarpa]9114e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRX2 60S ribosomal protein L19-19802e-105
P49693 60S ribosomal protein L19-39051e-096
Q9LUQ6 60S ribosomal protein L19-28602e-091
P36241 60S ribosomal protein L196316e-065
Q3T0W9 60S ribosomal protein L196291e-064

TrEMBL top hits (Blast detail)Scoree value
Q8W101 Ribosomal protein L199687e-103
A9PB34 Ribosomal protein L199113e-096
B7FHF4 Ribosomal protein L199113e-096
B7FH56 Ribosomal protein L199079e-096
B9I4Y2 Ribosomal protein L199014e-095

Arabidopsis top hits (Blast detail)Scoree value
AT1G02780.1 emb2386 (embryo defective 2386); structural constituent of ribosome9953e-108
AT4G02230.1 60S ribosomal protein L19 (RPL19C)9059e-098
AT3G16780.1 60S ribosomal protein L19 (RPL19B)8601e-092
AT4G16030.1 structural constituent of ribosome2103e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  50%
 
112  50%

Unigene MembersMember information