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Information for unigene UN04673

FASTA Sequence
Unigene ID: UN04673Length: 1209 SSR 
GGAATTCATTTTGTGTGTGTGTGTGGTGGCGAGGAAGGAGCTTGTGAGCCATGTCCGACGTAGTAGCTGATGCTGAGCTCGCGGCG
GAGACGAGTGTTAAAGAAGATGCAAAGGCTGTATTGGAGACGGTTCAATCGACGAAGCAGTTCTCGGTATATGAAGCGAGTTCGGA
GGAACTTATAGAACGATCGATGGCTCCTATAAAAAAAGAGTTCCTATGTCCTCCTCCTCCAAGCCGTAACCCGAAGCAAAGTGACG
TTAAGGCGGCGCCTCCTCATCCGAGCTTAGTCCAGGAGAAGAAATCGAAGAGACAGCTCAAAAGGGAACGCCGTGAGAAATGTGCG
ATAAACCTGTGTCCACAGGTTTCGAGAACAGAAGACGTTAATTCCTGTCAGTACAAAGAGAAATGCCGATTTAATCATGACATTGA
AGCTTTCAAATCTCAGAAACCAGATGATATAGAGGGGCAATGCCCATTTGTGGCCTCTGGAATGAAGTGCCAATATGGTTTATCAT
GCCGATTCTTAGCACTCACACACATGTTTCTGATGAGAACCAAATCTCTGAGATTAACGTTTTTAACAAAGAGACACAGAGGCTTC
TATGGAAAAATAACATGACTTTTCTCAAAGCTGATGCCAAACTTAAATCCCTTGGCCTTATGGTATCTTGTACATAATATGCTTCT
TGTTTTTTTGACTAACTCCCATATCTTTTACCATGGCCATGGGACATGAATATTTCTCTTCCGCTTTTTGTCTCATTATTTCCATA
CCATTTCTAGGGGCATGCCAAGAAAAGCAATGTTGCTGAAGAGAATGACGCACATAAACCTCAAAATGATGCTCAGGCAACTGAAG
GTGTTGATATTCCTGGGCCATTGGAAACTGAACAAGTTCGTCCTGCAAAAAGGGCAAAATCGGAGACTTCTCAACTTGGAGATATT
AATATTGGGGTGAATGTGGAAGATAACCCGGAAAAGAACGGGCATTCTACTTCAAAACCCAAAGTAGAGGATGAGGCTAGCATCAA
AGTTGTTGAAACTGATGGGAGCCTAAAATCCCACCCTCGTGAGAAGAAAAAGCTTATTGATTTTAGGGATAAGTTGTACCTTGCAC
CCCTAACAACCGTGGGCAATCTTCCCTTCAGAAGACTTTGCAAAGTATTGTGAGCAGATGTGACTTGTGGTGAGATGGCTATGTGT
ACCAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195600 tRNA-dihydrouridine synthase 3-like protein [Arabidopsis thaliana]6204e-062
XP_002868869 dihydrouridine synthase family protein [Arabidopsis lyrata subsp. lyrata]6142e-061
Q9T0J6 RecName: Full=tRNA-dihydrouridine synthase 3-like; AltName: Full=Zinc finger CCCH domain-containing protein 50; Short=AtC3H505963e-059
XP_002513011 tRNA-dihydrouridine synthase, putative [Ricinus communis]3893e-035
CBI37975 unnamed protein product [Vitis vinifera]3516e-031

Swiss-Prot top hits (Blast detail)Scoree value
Q9T0J6 tRNA-dihydrouridine synthase 3-like5961e-060
Q7XT07 tRNA-dihydrouridine synthase 3-like3021e-026
Q7ZWS1 tRNA-dihydrouridine synthase 3-like1982e-014
Q28BT8 tRNA-dihydrouridine synthase 3-like1953e-014
Q96G46 tRNA-dihydrouridine synthase 3-like1855e-013

TrEMBL top hits (Blast detail)Scoree value
B9RG59 tRNA-dihydrouridine synthase, putative3892e-035
B7ZX41 Putative uncharacterized protein3183e-027
A2XPT3 Putative uncharacterized protein3093e-026
Q01ML2 H0613H07.1 protein3093e-026
B9HRE6 Predicted protein2986e-025

Arabidopsis top hits (Blast detail)Scoree value
AT4G38890.1 dihydrouridine synthase family protein5961e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
81  50%

Unigene MembersMember information