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Information for unigene UN04676

FASTA Sequence
Unigene ID: UN04676Length: 849 SSR 
CAAATCCCTAAAGTTCAATACTGAATTCTTCAGCAGCAGCAAGCAAACACACTCTCTCTAAAATAATCTCTCTCTCTCTAAGGAAG
AAGAATAAGATGGGGTTACAAGGTCAACTCTCTGACGTTTCATCAGATTCAATCCCTCTCATGCTCGTCGCTCTCCTCGCTACTCT
GTTCAAACACGTCCGCTCTTTCTTCCTCCGCTTCTCCTCCTCCTCCTCCGTTTTGGACGAAGATGCTCCTCTCTCCATTTCCTCAG
GGTTTGCTAACATCGCCGTACTCGCCGACCAGCTCAAACTCAACCGTCTCTTCTCATACCCCTACGACCATAAGGCCGCCGCAGCC
GCATCCGACTGCATCGTGTGCTTGTCTACACTCAAGACCGGAGAAGAAGTGAGGAAGCTGGGATGCAGACACGTGTTCCACAAACA
GTGTTTGGAAGATTGGCTTCAACATCTTAATTTCAATTGTCCGCTTTGTAGATCTCCGTTGGTTGGTCGTGGAGGAGGATGTGAAT
CGATCTCTTCTCCTCTCTCTCTTCTCTCAGAAGTTCAGTGAGTTCTGTTCATTGTCTGATGAACAAAAAAAAAGGGAAAGAGAAAG
AGAGAAGAAGAGTTTGGGCGTTTTTTTGATCTCGCTGGCTTTCTCCTCTTTCTTTTGTTTTTTTTTCTTTAGGGATTTGTGTGATA
TTATTATTTTTTTCTTCAAAAGGGGATTCTTCGAAATCTCTTCTATATATATTTTTTTTTGAGGAATGTCTCAGATCAGATCTGAG
AGGTTCTTTTGTTATTCAAATTTTCGCACATGTAAATTTTCTAGTATGAATTATGAAAAGTGTTTGTGTTGTTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172962 E3 ubiquitin-protein ligase RHA2A [Arabidopsis thaliana]4222e-039
XP_002892849 ring-H2 finger A2A [Arabidopsis lyrata subsp. lyrata]4105e-038
XP_002283507 PREDICTED: hypothetical protein [Vitis vinifera]3882e-035
NP_565253 putative E3 ubiquitin-protein ligase RHA2B [Arabidopsis thaliana]3353e-029
XP_002875062 hypothetical protein ARALYDRAFT_484022 [Arabidopsis lyrata subsp. lyrata]3326e-029

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZT50 E3 ubiquitin-protein ligase RHA2A4273e-041
Q9ZU51 RING-H2 zinc finger protein RHA2b3351e-030
P87237 Uncharacterized RING finger protein C4G3.12c1486e-009
Q9Y4L5 E3 ubiquitin-protein ligase RNF1151281e-006
Q9P7E1 Uncharacterized RING finger protein P4H10.071272e-006

TrEMBL top hits (Blast detail)Scoree value
Q1H5F4 At2g011503352e-029
B9HWB4 Predicted protein2922e-024
B9HJ71 Predicted protein2903e-024
B9SJY5 Putative uncharacterized protein2152e-015
Q9SI09 Putative RING zinc finger protein1659e-010

Arabidopsis top hits (Blast detail)Scoree value
AT1G15100.1 RHA2A; protein binding / ubiquitin-protein ligase/ zinc ion binding4272e-042
AT2G01150.1 RHA2B (RING-H2 FINGER PROTEIN 2B); protein binding / ubiquitin-protein ligase/ zinc ion binding3351e-031
AT2G04240.1 XERICO; protein binding / zinc ion binding1656e-012
AT2G04240.2 XERICO; protein binding / zinc ion binding1656e-012
AT3G61460.1 BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding1388e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  100%

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