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Information for unigene UN04705

FASTA Sequence
Unigene ID: UN04705Length: 1314 SSR 
AGCATTTTGTTTCTCAATAGAAACATTTTTCAATCTGCAAAGAAATTTTACAGAATAGGTTTTAACGAGTTGGGGGTTATTAATAC
AAAGTTTCCCCCAATATTTTTGTTTCATAGAGTTAAAAAACCAAATTGTATGTTTTGAGAGAGAGCCATTACGCCTCTTCATCATC
ATCATCATCATCCTCAATGTAATATCTTCTTCTGACACGGCGTCTTTGAGTTCCAGACTCTTGTCCATCAGAAGACTGATTATTGT
TCTCCCCATCTCTAGCTGCTGATGTTCCTGTATCACCACCTTCATAGCTCTCTCCCCAAAGCCTTGAAGATCTTCTCCTCACACCT
ATATGTGACCTAGCTCTAGACGTACCTGACCAGCTGCTACTACTACTCCTTACCCCACTTGACTCTGGCCTAAACACGCGGATGAG
GAAGAACACTGTAAGCCAACCACCATCATCAAACGACATGATCCCATCTTCGTTGCTGCTGCTGCTTCTTTCTTCTCCTCCTCCTA
CTCCAAAAGAAGACTGTAGTGTGCTAAGCAAATCACCCAAGTCTCTCTGCCTTTCTAGCCTCCTCCAGCTTCTCTGCCTCTCCGGA
TCAGCTTCTGATGGCCTCACTCCCGGATGCAGCAGCCTCGCGTGTTTTCTCAAATCAGAGTAGGTTCCGCTGAACTCACAAGTTTC
GGAAGAACAGCTTCTATGTTTCGCGTTCATGAAACATCGAGCAGGCTCAGCAACTACCCATTCTTTTATATCTCCACGGCATAACG
GGCAAGTAAGCTTCGGTTTGCCTGCATCTGTCTCCACAACACCTTCATCCTCTCTCGGATTCACAACTGTCACCTCAGAAGCTGAA
GCCACTGCTGCACCTTCTGTCTGTTTAGAAGCTTTGCGGTACTGATCGAAACAGTTGGAATGGCGGTGGCTAGTGTCACACATGTA
AGGCCTACAGCCATTATCATAGGAAGAACAGACGAGAAGGATTCCGTTGTGAGGATGTTCCATACAGACAGGACATCTAGCTTCTT
CCCATTCCTTGACTTGCTTCTCACTCGGCTTCAGAGCGCGGCTTGACTCACAATACATAGGCGATCCTCTAAGCCTTTCATGAGAT
ACGGAGCGTTGTTTCCTCTCTTTAGGCATGGTCTTAACTTTAAAACCTGCAAACGGAGAAAGTGTTGGAGCTTTGAGGGGGAGATG
AGATGGTGAATCGATGGATTAATGGATGAAACCCTAAATCGGGCTCCCCATATAGAGAGCCAACGAGTCGAGTCGAGACGAGGAAG
ATGAGGCGGCTACTTTCTTTTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002330503 predicted protein [Populus trichocarpa]8931e-093
XP_002308310 predicted protein [Populus trichocarpa]8615e-090
XP_002875291 hypothetical protein ARALYDRAFT_904770 [Arabidopsis lyrata subsp. lyrata]8104e-084
NP_566784 uncharacterized protein [Arabidopsis thaliana]7352e-075
XP_001762155 predicted protein [Physcomitrella patens subsp. patens]6545e-066

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9N5I9 Predicted protein8937e-094
B9H984 Predicted protein8614e-090
Q9LUA0 AT3g25910/MPE11_67351e-075
A9S773 Predicted protein6544e-066
B8ABU8 Putative uncharacterized protein6033e-060

Arabidopsis top hits (Blast detail)Scoree value
AT3G25910.1 zinc ion binding7412e-078
AT4G31410.1 unknown protein4292e-042
AT4G31410.2 unknown protein4292e-042
AT3G24740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3182e-029
AT3G24740.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3182e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information