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Information for unigene UN04782
| FASTA Sequence |
| Unigene ID: UN04782 | Length: 1500 |
SSR | | GCATATAAATGCTTTTTTGTTTAAATTAATTAATAAACATTGTTTGTTTTTTTGTATTACAAAGAATGGAAAAAAGAAAGAAAGAT
ACAAGCTATAATTTTGTAGGAAGGGGAAGAATAGAGATTTGGCCGTCATGGCGTTACTTTGACAGCCTCCAAAGAGACATTATACA
CTAAACATATCTACCGGAGTTCCACCACTGGTTTTGCCTTCTTCTTGGAACCAGTTCAGAAACCTGCAAGTCTTTTGTTTTACTTC
TTGCTGGTTCTGAACAAAACAACACTGGTGACTGACTTCTACAATGAGAATGTTCTATCATCATTCATCAAATCCCTCTCTCTCTC
AGTTCGGTTGCTGCATCTGGGAGAACAGTATTCATCCAACATGGAGATTGAGCAAGGCAAGGAGCTGCTGCTAGAACAAACCTTGC
TTGGCTGTTGTTGTAAGCAGAAGTTCCAGGTGGTGGTGGTGGTGGTGGTGCTTCGAAGAATCCATTCATATGATAGTCTCTCTGGT
TCATTGGAAAGTTAAAAACCGGAGGATGAGGAAGAGGAGGAGGAGGATAGGTTTGGTGGTGGGGCTTCACATCGTTCCGGATATTC
GGATTGTATGAGATCATGTTATTATTAGTGAATGGCTGCTGCATGTTTATTTGCGGTTTGATATCTCCGTTGGTAGTGGTTAATTC
ATCAAGAAAGCCTGGATAGCTCCCAAATGAAGAACTCGCAGAGCACTCAACTTCCCTCTGAGGGATTGGATTGTGTTCCTCGGTGA
CAATGTTGGTGTTGTTGTTGCTATTGAGTATCCATGACATGGATTGAAGCTGTTGTTCTAAAGGAATCTCAATCCCATCTTGCAAC
GAGCAGGTTGACCAATCTTTAACGAAGTTTGCGTTTTCGATTTGCATTGCTTGCTGCTGCTGCTGCCCCAAATGTTCCTTATGCGC
ACGCAATTGATCAAGGGATTGCCTGATAGAAATCTCGAGCTGTCCCAAGTGGTCAACGTTGTTTATCTTATCGAGTTCTGTCCAAT
AACTTAATCTTCCATGTATTTCAGATATCCGAGCTTGCAAGACACTTGCTTGAGTACTCAAGTCCTCTGTTGTTGAATTACTTGAG
GCTATTAGTTCTCTTATATTTACATTGTGATCCAACTTTAAGAACGTTTTCTTCAAGGTTTCAAGACTCTCGACCTTCTTTTTTGT
TCTTTCCTCCGGTGTTACTTGAGAAAACTTAGCAATCACCTCTTCAATGCTACTTCTATGACCGCAACATAGTGAAGCTTTACCAG
CAGGAGAGAACATAAGAAGAATAAGATCAATGTCACAGAGAATGGAAAGCTCATTAGCCTTTTTCAAGATCCCATTTTTCCTTTTA
GCAAACGTTGCTTGGCGTCCGTTTGTGTTCTCTAACTTCTTTATCTTCAATTTTACCCTTCCCATCCTAAAGAAGCAAATTCAAAC
GCCAAGCGGATACTAACCATGGAGGGAGATCTTAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875185 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1332 | 2e-144 |
| NP_001077873 protein agamous-like 30 [Arabidopsis thaliana] | 1126 | 1e-120 |
| ABK28481 unknown [Arabidopsis thaliana] | 1126 | 1e-120 |
| XP_002311308 predicted protein [Populus trichocarpa] | 779 | 2e-080 |
| XP_002522456 mads box protein, putative [Ricinus communis] | 744 | 2e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6H711 MADS-box transcription factor 29 | 196 | 3e-014 |
| Q40702 MADS-box transcription factor 2 | 192 | 1e-013 |
| Q9XGJ4 MADS-box protein GGM13 | 191 | 1e-013 |
| Q8VWM8 MADS-box protein ZMM17 | 191 | 1e-013 |
| P29383 Agamous-like MADS-box protein AGL3 | 186 | 5e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MEI3 Putative uncharacterized protein (Fragment) | 1126 | 8e-121 |
| Q1PFA4 MADS-box family protein | 1126 | 8e-121 |
| B9S8Y7 Mads box protein, putative | 781 | 8e-081 |
| B9HI83 Predicted protein | 779 | 1e-080 |
| B9RLX3 Mads box protein, putative | 651 | 1e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G03060.2 DNA binding / transcription factor | 1126 | 4e-123 |
| AT1G69540.1 AGL94 (AGAMOUS-LIKE 94); DNA binding / transcription factor | 595 | 2e-061 |
| AT1G18750.1 AGL65 (AGAMOUS-LIKE 65); DNA binding / transcription factor | 589 | 8e-061 |
| AT1G18750.2 AGL65 (AGAMOUS-LIKE 65); DNA binding / transcription factor | 402 | 4e-039 |
| AT2G03060.1 DNA binding / transcription factor | 293 | 2e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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