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Information for unigene UN04802
FASTA Sequence |
Unigene ID: UN04802 | Length: 1571 |
SSR | | GCCTTGAACGTGTTCTCATGGTTTAACACAAAAATTAGACAAAATTAATTGTACATTAATAATAATTCCATAACATTAAACAGTTC
TTATGAATCTCTAGTTTCACGTTCTTCATTGTTTCTCTTTCAGGGTAACCAAAAATAAATGACTAACCTAATCTAGTACACACATC
TCTTCTTAGGCCTCTCCAACATACTCCAATTCACTTACCTCAGCCGAAATTAACTTTAAAACAACAAGGCAGATATGACTGAATGC
AGAAACAGCCAATGAAGTATCTCTTATCGTTTTAACTTTCCTCTGGAAGGTGTTTATGCCAGAAATAACCGGAGAGAGAGGCCTTT
GTCTATTAATTGTCTGTCTTATCGTCATCCTTCAACACTGTACTAGGACCATCATCAAAACCGGACACAGGAGCAAGTTCGTTTAG
GTCAAGGTAATGCCTTTTGCCTAATACACCCTCACCTTCTTCTTGGTCTGTGCCATTTGACTTGTTCAGTTGATTATTATTCTCTG
TACCATTTGCTGTCCCGGCATTATCATTGACCTCTCTGGGCTCTTCTTCTTCTTCTTCCTCTACTTCTTCAGCAGAATTTGTTTCT
GGCCCATCTGCATTTTCTTCAGAGTCCTCACTTCCCATCGTGAAATCCCCATTCCCTGATTCATCAGTCTCTTCATCTGGATCTGG
CTCTACCAATCGCTTACGTTTTGCCGCTCCTGCTGCTGCTTCATTGTCTGATTCCGAGAGCTCATATTGTTGGTAATCGATTCTTG
TGGCTCTTTTACTACGCCTCAGGCCTGGCCGGGAACCATTCGACCTTGATCTTAACTTGGTTCCTCTCCGGGGCATTTTCCTAACC
CTTCGGGGCTCATCACTATCTTCTTCGCTAGCACTTGGAGAATCTTCCTCTTCCTCTTCCTCTTCTTCTTCCTCGTACTCGGCATT
GTCTTCATCCCCATTTGTACTCTTCATCTCCTTTCTCTTCCTCTCCCTCGGAACCACTAGAAAACTTCTTCTGTTTACGCTTCCTC
AGATACTCGTCATCATAAACTGCTTCCCCAACAATGTCATCGTCGCTTTCAGATTCTACATGATTGTCTGGAACAGTTTCAACAAA
GTCCGTTGCTGAATACCGCTGGGGTCGTTGTCTGCGCCTGTTACTTCTGTCCAAGGATTCATCTCTCTGCTCATCGAACTCATCAC
CATCAGCAAAATCAGAAGAGCTACCAGATGCTGCATCGTTCACAGGTTCAGCAGGGTGGCTTGAACTTGTTGATCTGCCATTCACA
AGAGAGTCCACTCTAGCTGATTCTCTTCTGTGGAGAAAAGGTTCTGGTGGTGGATGTTTCTTCGTTGATATATTGATAGCTTCGTT
TATCGACCTATCATAATCATCAAAAGTGTATCTAACTGGCTTCCTATCACGGCGAGAACGACCACCACCAACACCGTCAACAACCA
AATGGTTATCAAGGAGAAGAGCCTGTCTATGCTGCTTTTTCAACAGCTTCTCTTTCCTCTTGTGTTCTTTTTCTATCTCAGGAAGC
ATATCTCTCGTTAACTTCTTCCC
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GenBank top hits (Blast detail) | Score | e value |
NP_173329 DDT domain-containing protein [Arabidopsis thaliana] | 859 | 1e-089 |
XP_002890307 aminoacyl-tRNA synthetase family [Arabidopsis lyrata subsp. lyrata] | 823 | 2e-085 |
AAF79284 F14D16.10 [Arabidopsis thaliana] | 788 | 2e-081 |
XP_002266347 PREDICTED: hypothetical protein [Vitis vinifera] | 625 | 2e-062 |
CBI15298 unnamed protein product [Vitis vinifera] | 615 | 2e-061 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9BW71 HIRA-interacting protein 3 | 134 | 6e-007 |
Q75JC9 Uncharacterized protein DDB_G0271670 | 127 | 4e-006 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9LMD2 F14D16.10 | 788 | 1e-081 |
B9R920 tRNA ligase, putative | 604 | 3e-060 |
Q2PF39 Aminoacyl-tRNA synthetase | 562 | 2e-055 |
C5XCJ0 Putative uncharacterized protein Sb02g005710 | 512 | 1e-049 |
B8B858 Putative uncharacterized protein | 469 | 1e-044 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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