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Information for unigene UN04804
| FASTA Sequence |
| Unigene ID: UN04804 | Length: 1601 |
| SNP | GAATAAGAAAATCATTGTTTCAGCATTAGAACAATTTTTTTACACATTTCGAGAAATAAAGCAAAAGAAATGTTTTGGAATCAAAT
AAAACATGGGTTTGAGATTTGTTTTACTTCTCAGTACATACATAAGGAGAAAGTGAAGAGACAATGGTAGTGACAAATCTATTAAC
CTTCTTCTCCAAACTCTGTGTGATCTTCATGACGTCAAGTCAGATTGCTCACGTGGCTCTGTCTAGCAAGTACTTCTCGAAATCTG
TTCTTGTGATTGGTGGTGGAATATCTTTTCGGCAAGGCCTTTAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGCTGCC
TCGGTCCACATGGCATCCATGTACCATCAGGTGACTTGAAAAAGAACATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACA
TCTTTTACACAAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATATTCAAAATCAGATTCAGTTAAATTATG
AGGCGTGTCTCCCAAATGAACTTTGAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTTTATCAAAACGTC
GCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTTGCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATC
TGCACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTTCTCCACGTTGACCACACAAGGAATCTATCTCATC
AACGAAAATAATCGAGGGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACTTTCACCCATCCACTTCGAGA
CCAGGTCTGATGAAGACACGCTAAAGAAGGTAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTTCCAGGC
GGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGTGAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTG
CAAAGCTTGCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTCTCCCTCACAATCGCAGAGTTCAATCCAG
CTCGGAGCTTAGACTGCTCCGCGTCCTCTCCTCCATCCCCTCCTCCATCTTTCGCCTTGCTCTTCGGCCTCGTCGCCACCGCCGCC
GCCGCGTCGCCGCCGTTAGATCCAGGACCCGATCCTCCTCCTTCATCGAGAACGGCACGGATCTCCTCCGCGCGGCGGAGGTACTC
GGTGAATTTCTGGGTGATGGCTTCTCTGATCTTGGGGTTCTTCTCGTACTTGAGATGCGTTTTGAAGTACTCGAGCGCGTTCGTGT
AGAGAGGGAAGGCCTTGTTGTAGTTCCCGGCATTGTCTTCTTGAACCGCTTGCTTCACGTACTCGATCGCCCGTTCCTTGAAATTG
CTGTACATAGCTTAGGGTTCGAATCGAAGGTAGAGTCTCTCTTGTGTACTTGGAGGATCGGTTTGGTTTGATCTAGGATCGTAGAT
GATAAAACTCGTGGGGATGAATTTGACCAGAAGATCGGAGAGAGAGGATGGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880982 hypothetical protein ARALYDRAFT_481753 [Arabidopsis lyrata subsp. lyrata] | 1893 | 1e-209 |
| NP_180328 vacuolar protein-sorting-associated protein 4 [Arabidopsis thaliana] | 1892 | 2e-209 |
| AAM65285 putative ATPase [Arabidopsis thaliana] | 1884 | 2e-208 |
| AAF21428 salt-induced AAA-Type ATPase [Mesembryanthemum crystallinum] | 1859 | 1e-205 |
| BAJ90371 predicted protein [Hordeum vulgare subsp. vulgare] | 1818 | 7e-201 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P52917 Vacuolar protein sorting-associated protein 4 | 1079 | 2e-116 |
| Q09803 Suppressor protein of bem1/bed5 double mutants | 1017 | 2e-109 |
| Q54PT2 Vacuolar protein sorting-associated protein 4 | 1001 | 2e-107 |
| A0JMA9 Katanin p60 ATPase-containing subunit A-like 2 | 654 | 3e-067 |
| O61577 Katanin p60 ATPase-containing subunit | 653 | 4e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZNT0 F10A12.27/F10A12.27 | 1892 | 1e-209 |
| Q8LAK9 Putative ATPase | 1884 | 1e-208 |
| Q9SEA8 Salt-induced AAA-Type ATPase | 1859 | 9e-206 |
| C5XQ57 Putative uncharacterized protein Sb03g006580 | 1817 | 7e-201 |
| B6T3Y2 Vacuolar sorting protein 4b | 1816 | 9e-201 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G27600.1 SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1); ATP binding / nucleoside-triphosphatase/ nucleotide binding | 1904 | 3e-213 |
| AT2G34560.1 katanin, putative | 654 | 3e-068 |
| AT2G34560.2 katanin, putative | 654 | 3e-068 |
| AT2G45500.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding | 629 | 2e-065 |
| AT2G45500.2 ATP binding / nucleoside-triphosphatase/ nucleotide binding | 629 | 2e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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