Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN04804

FASTA Sequence
Unigene ID: UN04804Length: 1601  SNP
GAATAAGAAAATCATTGTTTCAGCATTAGAACAATTTTTTTACACATTTCGAGAAATAAAGCAAAAGAAATGTTTTGGAATCAAAT
AAAACATGGGTTTGAGATTTGTTTTACTTCTCAGTACATACATAAGGAGAAAGTGAAGAGACAATGGTAGTGACAAATCTATTAAC
CTTCTTCTCCAAACTCTGTGTGATCTTCATGACGTCAAGTCAGATTGCTCACGTGGCTCTGTCTAGCAAGTACTTCTCGAAATCTG
TTCTTGTGATTGGTGGTGGAATATCTTTTCGGCAAGGCCTTTAGCTGCTAAATCTTGCATTGTGGTTTGGATAGCTCCAGGCTGCC
TCGGTCCACATGGCATCCATGTACCATCAGGTGACTTGAAAAAGAACATTGCGTCTTGAGTTTTGCGAACAGGCTCAAAAAGGACA
TCTTTTACACAAACGGAAACATCTGAACCAGAAAACCCTTCTGTCTTGAGCCCCAAATATTCAAAATCAGATTCAGTTAAATTATG
AGGCGTGTCTCCCAAATGAACTTTGAACATGTGCTGCCTAGCCTTGGCTTCTGGGAGAGGAATATAAATACGTTTATCAAAACGTC
GCCTAATAGCCTGATCAAGAGCATAAGGTGTATTGGTTGCTGCAAGCACAAGTACTTTATCATCACTGTGTCCAACACCCTGCATC
TGCACAAGAAGCTCTGTTTTGATACGTCTTGAAGCTTCACTCTCGTTTCCTTCTCCACGTTGACCACACAAGGAATCTATCTCATC
AACGAAAATAATCGAGGGAGAACTTTCACGGGCCATCTCGAAAAGGTTTGACACTAGCTTCTCACTTTCACCCATCCACTTCGAGA
CCAGGTCTGATGAAGACACGCTAAAGAAGGTAGAGTCAGCTTCAGTAGCAACAGCTTTGGCCAAGTAAGACTTTCCTGTTCCAGGC
GGCCCATACAAGAGAAAAGCTCGCCACGGCCTCCTCTTTCCGGTGAAGAACTGAGGAAACTTGACAGGCAAAATCACAGCTTCCTG
CAAAGCTTGCTTAGCGCTTTCGAGCCCAGCAACATCTGTCCACTTAATGTTAGGCTTCTCCCTCACAATCGCAGAGTTCAATCCAG
CTCGGAGCTTAGACTGCTCCGCGTCCTCTCCTCCATCCCCTCCTCCATCTTTCGCCTTGCTCTTCGGCCTCGTCGCCACCGCCGCC
GCCGCGTCGCCGCCGTTAGATCCAGGACCCGATCCTCCTCCTTCATCGAGAACGGCACGGATCTCCTCCGCGCGGCGGAGGTACTC
GGTGAATTTCTGGGTGATGGCTTCTCTGATCTTGGGGTTCTTCTCGTACTTGAGATGCGTTTTGAAGTACTCGAGCGCGTTCGTGT
AGAGAGGGAAGGCCTTGTTGTAGTTCCCGGCATTGTCTTCTTGAACCGCTTGCTTCACGTACTCGATCGCCCGTTCCTTGAAATTG
CTGTACATAGCTTAGGGTTCGAATCGAAGGTAGAGTCTCTCTTGTGTACTTGGAGGATCGGTTTGGTTTGATCTAGGATCGTAGAT
GATAAAACTCGTGGGGATGAATTTGACCAGAAGATCGGAGAGAGAGGATGGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880982 hypothetical protein ARALYDRAFT_481753 [Arabidopsis lyrata subsp. lyrata]18931e-209
NP_180328 vacuolar protein-sorting-associated protein 4 [Arabidopsis thaliana]18922e-209
AAM65285 putative ATPase [Arabidopsis thaliana]18842e-208
AAF21428 salt-induced AAA-Type ATPase [Mesembryanthemum crystallinum]18591e-205
BAJ90371 predicted protein [Hordeum vulgare subsp. vulgare]18187e-201

Swiss-Prot top hits (Blast detail)Scoree value
P52917 Vacuolar protein sorting-associated protein 410792e-116
Q09803 Suppressor protein of bem1/bed5 double mutants10172e-109
Q54PT2 Vacuolar protein sorting-associated protein 410012e-107
A0JMA9 Katanin p60 ATPase-containing subunit A-like 26543e-067
O61577 Katanin p60 ATPase-containing subunit6534e-067

TrEMBL top hits (Blast detail)Scoree value
Q9ZNT0 F10A12.27/F10A12.2718921e-209
Q8LAK9 Putative ATPase18841e-208
Q9SEA8 Salt-induced AAA-Type ATPase18599e-206
C5XQ57 Putative uncharacterized protein Sb03g00658018177e-201
B6T3Y2 Vacuolar sorting protein 4b18169e-201

Arabidopsis top hits (Blast detail)Scoree value
AT2G27600.1 SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1); ATP binding / nucleoside-triphosphatase/ nucleotide binding19043e-213
AT2G34560.1 katanin, putative6543e-068
AT2G34560.2 katanin, putative6543e-068
AT2G45500.1 ATP binding / nucleoside-triphosphatase/ nucleotide binding6292e-065
AT2G45500.2 ATP binding / nucleoside-triphosphatase/ nucleotide binding6292e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  45%
 
192  18%
 
214  36%

Unigene MembersMember information