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Information for unigene UN04811

FASTA Sequence
Unigene ID: UN04811Length: 1307 SSR 
AAATTGCTGGAAGGAGAAGAAAAGGTTTATACATAACTCACTGAACATGATCAAAGCACATTTATGTTTATCAACGAACTAAACAT
AGTGATTTTCAATGCTCTGCCAAAGCTGAGCACATTATCTCCTTTGCAAATGAAGTACACATATCCAGTGTTTTGGCTGTAGCAGA
GCATCATTCTCGATATAAAACCAAACACGGTTTTCAGTTCTCTCCCATGTTTATCAAGTTCCAAGAGCATCATCCTGAGGAGATGA
GTCCCGATTCTCCTCTTCCTCTTCATCCTCCTCATCCTCGTCATCATAGTCAGCAGAGTCAGGCTCAGGCTGCCCGTTCAAGTCAA
CATTCACGCCGTTCATTTTCCTAACAAACTGACCCTTAACACGTGGTCTCCTCTCAGCAAGCCGCTTCCTATTCACATACCTAATC
TTCTTGTCAAAACACCTTTGGTTTCTTTTGCGTCTAAATTTAAGCAGCGCTTCCTCTCTTCTGTCAAGTTTAGTCACTCTCACCTC
GTTAGGAGACGGGTGGTTTCCTATCTGTGTCTGTGGCCAAGAATGATGATGATGATGATGGACCATAGGCATCTGACCATTCTGTA
AGGGCACCTGACCATTCTGTGACATCTGACTGTGCTGTAACGACGTGTTCATGGGATGGTGGTGGTAATAAGGAAACCCTGTCATT
CCATTCAGATGATTAGGTGGGCAATGAGGATGTTGATGACCATACTGAGGCATCATGGCCGCTGATTGCATCATAACTTGGTTCAT
GACCCCATGCATATAGTAAGGATACGCATTTTGTGCAGCGAATCTCGAAGCGTTAATTTGAGATGATGAATCCTTAGCAGCGACCC
GGGTATCATCCATAGCTCCTTGGTAACAACTCCTACTAGTACTATGAAGTTCCATTGGTGGTGGAAGCGTGCGTGACCGCTCAAGG
GAATTTGGAACTTCTTGGTAACTCTTACTACTGTGAAGTTCCACTGGTGTTGGAAGCGTGCGTGACCGCTCAAGCGTGCCATTCAC
TGAGTTCTCTCCTTGAGCAGTGAGCTCTTTACCTCCTCTTGTTTGTTTGGTGTTGTTCTTGGTCACCTAACTTGCCACCACTTGAA
GCTTCTCAGCCATACCTGGATGAACTGAGCCATTTCCATTGACAGTAGACTTGACATATGTGAAGAAAGCCGAGGATTCTCCAATC
TTCAACCTACTTTTCTTTGGCACTGAAGAAAATTGCGCTGGATTAGTGCTTCTTTTCGTAGGCTCATGGTGAGGCTCAGGAAGATG
ATTCAGTGGAGGCTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA58339 pseudo-response regulator 1a [Brassica rapa]15856e-174
CAB75508 ABI3-interacting protein, AIP1 [Arabidopsis thaliana]9216e-097
NP_200946 two-component response regulator-like APRR1 [Arabidopsis thaliana]9216e-097
XP_002864730 hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp. lyrata]9191e-096
ADA58344 pseudo-response regulator 1b [Brassica rapa]4484e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9LKL2 Two-component response regulator-like APRR19212e-098
Q689G9 Two-component response regulator-like PRR12152e-016
Q8L500 Two-component response regulator-like APRR91784e-012
Q689G6 Two-component response regulator-like PRR951784e-012
Q93WK5 Two-component response regulator-like APRR71766e-012

TrEMBL top hits (Blast detail)Scoree value
D2KK85 Pseudo-response regulator 1a15854e-174
D2KK90 Pseudo-response regulator 1b4483e-042
Q56TL2 Timing of CAB expression 1 protein4286e-040
C0SNP3 Timing of CAB expression 13694e-033
B9N4C8 Pseudo response regulator3632e-032

Arabidopsis top hits (Blast detail)Scoree value
AT5G61380.1 TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulator9266e-100
AT2G46790.2 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator1783e-013
AT2G46670.1 pseudo-response regulator, putative / timing of CAB expression 1-like protein, putative1783e-013
AT2G46790.1 APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator1783e-013
AT5G02810.1 PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator1765e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information