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Information for unigene UN04854

FASTA Sequence
Unigene ID: UN04854Length: 1475 SSR 
GGGGGGCCGCTCTCTCTAGGGTTTTAAAGAGGGTTTCACACTCCGTTTCCTCCGCCAGAAGAAGATGAGCAACGACAACTTGAACA
TGTCCGATCTCACCGCCGCTCTTAACGTGGAGGATCGTGCAGGCCTTGTCAATGCTCTTAAGAACAAGTTGCAGAATTTGGCTGGA
CAACACTCGGATGCCCTTGAGAACTTGACTCCCGCTGTCAGGAAGCGTGTCGAGGCTCTAAGAGAGATTCAGAACCAACATAATGA
AATTGAAGCCAAGTTTTTCGAGGAGAGGGCAGCTCTTGAAGCTAAGTATCAAAAGTTGTATCAGCCTTTTTATACCAAGCGTTATG
AGATTGTCAACGGTGTGGTTGAAGTTGAAGGTGCTCCTGAAGAAGTAAAAGCCGAACAGGGAGAAGATAAAGCTGCTGAAGAGAAA
GGAGTTCCGGATTTCTGGCTTATTGCACTGAAGAACAATGAAATAACTGCTGAAGAGATAACTGAGAAAGATGAAGGTGCTCTTAA
GTATCTTAAGGATATCAAGTGGAACAAGGTTGAAGAGCCAAAAGGGTTCAAGCTTGAGTTTTTCTTTGATGAGAACCCTTACTTCA
AGAACACTGTCTTGACCAAGACATATCACATGATTGATGAAGATGAGCCTATCCTCGAGAAGGCTATCGGGACGGAGATTGAGTGG
TATCCTGGAAAATGTTTGACTCAGAAGATCCTTAAAAAGAAGCCAAAGAAGGGATCCAAAAACACAAAGCCAATCACCAAGACTGA
GGACTGTGAGAGTTTCTTCAACTTCTTCAATCCACCTCAAGTTCCTGAGGACGAAGATGATCTTGATGATGAATTGGCTGAAGAAC
TCCAAGGTCAAATGGAGCACGACTATGATATTGGATCAACAATTAAAGAGAAAATCATCTCGCATGCTGTGTCATGGTTCACTGGT
GAAGCTGTAGACGAAGATGACCTTGAGATGGAGGATGATGATGATGAGATTGATGAAGATGATGATGAGGAGGACGAGGAAGATGA
TGAAGAGGAAGAGGACGAGGATGATGAGGACGAAGAGGAAGAGCAAGGAAAGAAGAGCGGAAAGAAGTCATCAGCTGGGCACAAGA
AGTTTGGAAGAAGTCAACTGGCAGAAGGTCAACAAGGTGAGAGGCCACCGGAATGCAAGCAGCAGTGAGTAAACAAACCTCATCTC
AGGTGAAGAAGATTTGGCTTATTGATGAAGAAGAAGAAGAAAGAGGTCTCTGTGTTTCTTAATTTGCTGTGGTTTGTATGATTATA
AATCAAGTTTTGGGTGGTGGTTTGCTAAAAACAAAAATTGGTTATTTGTTTTGGTTTTTCTGATTTTTCATTTGCAATGTGTTCTC
CCTTGAACTGGTTTGAGCAAATAGTATTTTGTTTTTAGAGAATATTACTCCCATAGACACATTACAAGTTCTCAATTACACACACA
GGCACTTTGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179538 nucleosome assembly protein 1;2 [Arabidopsis thaliana]17702e-195
NP_001077917 nucleosome assembly protein 1;2 [Arabidopsis thaliana]17202e-189
NP_001189553 nucleosome assembly protein 1;2 [Arabidopsis thaliana]17156e-189
XP_002886037 hypothetical protein ARALYDRAFT_480524 [Arabidopsis lyrata subsp. lyrata]16573e-182
XP_002308283 nucleosome/chromatin assembly factor group [Populus trichocarpa]15462e-169

Swiss-Prot top hits (Blast detail)Scoree value
P25293 Nucleosome assembly protein4535e-044
P87179 Cell wall integrity and stress response component 11831e-012
Q2TA40 Nucleosome assembly protein 1-like 41784e-012
Q7ZY81 Nucleosome assembly protein 1-like 1-B1784e-012
P13816 Glutamic acid-rich protein1775e-012

TrEMBL top hits (Blast detail)Scoree value
Q9ZUP3 Putative nucleosome assembly protein17702e-195
A8MRK6 Uncharacterized protein At2g19480.217201e-189
B9HDY5 Nucleosome/chromatin assembly factor group15462e-169
Q94K07 Nucleosome assembly protein15291e-167
B9RK80 Nucleosome assembly protein, putative15246e-167

Arabidopsis top hits (Blast detail)Scoree value
AT2G19480.1 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding17717e-198
AT2G19480.2 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding / binding17313e-193
AT5G56950.1 NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN 1;3); DNA binding15352e-170
AT4G26110.1 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding14841e-164
AT4G26110.2 NAP1;1 (NUCLEOSOME ASSEMBLY PROTEIN1;1); DNA binding14061e-155

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
107  70%
 
92  20%
 
181  10%

Unigene MembersMember information