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Information for unigene UN04884

FASTA Sequence
Unigene ID: UN04884Length: 1435 SSR 
AACTCCCTCCTCCCAAGAAAAAGTGTGCAGGAAGATGATGAACTCTTCTCTTCTAACTCCTTCCTCTTCTTCCCATGTCCAAACTC
CAGCCACTACCCTTGACCATGAAGATTTCCTCGACCAAATCTTTGCTTCCTCCCCTTGGCCCTCCGACGAAGCTCATCCTCCGCCT
CCTCCGTCCTCTGATGGCTTCGTCGACTCGAGGCATCAACAGATCACGATGATGCCTTTATCGTCTCATCATCAAAACGAGGTCGT
TGATGGCTCCTCCCTCCACGCTCTTTACAATGGCTTCTCCGCTGGCGGGCCTCTTCCTTTCCACATCCCTCAGGGATCGGCAGGTG
GATTGATGAATCAACAAGGACAAGCCCTAACGCAAACGCAACAACCGCAGGTAAGTGCGTCTGTAGCTACTGGCCGTACGGCGGCG
GCTCCACCGCAGAGTAGGACTAAAGTCCGAGCTAGGAGAGGCCAAGCAACTGATCCTCACAGTATTGCCGAACGGTTACGACGTGA
GAATTGCGGAGAGAATGAAAGGTCTTCAAGAACCCGTTCCTAATGGCAATAAGACAGACAAGGCATCGATGCTCGATGAGATTATA
GATTATGTCAAGTTCTTACAACTCCAAGTCAAGGTACTGAGCATGAGCAGATTGGGTGGTGGTGCTTCCGTTCCTTCTCAAATCTC
GGAGGAGGGTGGGTCTCACCTGAATGCATCCTCTGCCGTCGCGGGTGGTAATCAGGCGACCGGAAACTCCAATGATACCTTGACGA
TGACGGAGCATCAAGTGGCGAAGCTGATGGAAGAAGATATGGGCTCGGCGATGCAATACCTTCAAGGCAAAGGTCTTTGTCTAATG
CCTATCTCTTTAGCCACAGCCATCTCAACCGCCACGTGTCACTCGCGCAACCCTTTGATCCCAGGAGCTGCCGGCGTGGGAGGTCG
TCCTTCTTCTCCCAGTCTTTCCGGCATGACCGTACAGTCAACGACTAAGGTGAAGTTAAATGGTAACGGCGTGCCTGAGGGATCGT
CCTCTAGCGCCGTTAAAGAGGCTGTATTTGTTTCGAAACCGTGATAACGTCTCTCTCTCTCTCTCTTTACTTTTGGGGTTAGGCAA
AGAGAAAACAAAAACTAAACATAGAAAGTGGGCATGGAGTGGGACAGGAAAGTAACCAACTTTTGGTCAAATTCTACGAAGAATAA
GGTTGAGTTGTTTAATGTGTTTTCTCTAAACGACGCAGTATTTCTGGTAGAGTTGTGGTACAAAACCAGTCGGGCACACTTGATTT
TCTTTTCTTAAAGTATGCAATTATTTTCTTTTATCACACAATAAAGTTGGTTTCGGTGATCGAATCATTTGCTAGGAGAAGTACAT
ATTATTGGTTTTCGCATAGTCCATCTTATCTATACTATTATTTGTGATTATTTACTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180003 transcription factor bHLH66 [Arabidopsis thaliana]7496e-077
BAD44153 putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]7452e-076
AAM10955 putative bHLH transcription factor [Arabidopsis thaliana]7452e-076
XP_002880568 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]7031e-071
XP_002325140 predicted protein [Populus trichocarpa]5418e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUG9 Transcription factor bHLH667492e-078
Q9LSQ3 Transcription factor bHLH824608e-045
Q93Y00 Transcription factor bHLH73228e-029
O22768 Transcription factor UNE123083e-027
Q8S3D5 Transcription factor bHLH692833e-024

TrEMBL top hits (Blast detail)Scoree value
B9IMF5 Predicted protein5415e-053
B9SBX4 Putative uncharacterized protein5343e-052
A5C907 Putative uncharacterized protein5201e-050
D6MK13 Transcription factor (Fragment)4994e-048
B9HAS2 Predicted protein4977e-048

Arabidopsis top hits (Blast detail)Scoree value
AT2G24260.1 basic helix-loop-helix (bHLH) family protein7492e-079
AT5G58010.1 basic helix-loop-helix (bHLH) family protein4607e-046
AT1G03040.1 basic helix-loop-helix (bHLH) family protein3219e-030
AT4G02590.1 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor3083e-028
AT4G02590.2 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor3083e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
62  50%

Unigene MembersMember information