Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN04888

FASTA Sequence
Unigene ID: UN04888Length: 756 SSR 
CAGCAGTTGGTCGAACTGCACAAGAGGTTGTTAACGAAGTAAGACGACAGTTTATTGAGAGGCCTGGCATAATGGAGTACAAGGAG
AAGTCAGATTACAGTCGATGTGTTGCCATCGTCGCATCTGCAGCTTTGAGGGAAATGATAAAACCAGGAGCTTTAGCTGTAGCATC
ACCCATTGTAGTTGGTTTGGTGTTCCGAATCTTGGGATACTACACAGGACAACCTCTGCTCGGAGCTAAAGTTGTAGCTTCGATGC
TCATGTTTGCAACAGTTTGTGGTATCTTAATGGCACTTTTCCTAAATACAGCGGGTGGTGCTTGGGACAATGCAAAGAAATACATA
GAGACAGGTGCACTTGGTGGCAAAGGAAGTGAAGCCCACAAAGCAGCCGTGACCGGTGATACAGTGGGAGATCCGTTCAAGGACAC
GGCTGGTCCTTCCATTCATGTGCTCATCAAAATGCTCGCGACTATAACTCTTGTCATGGCTCCGGTTTTCCTTTGAGAGAGAACCA
TTTTACCTATCCATCGCTGTTTGTTTGCCTTAAAGACCATCTCTTGCACATAGACATAGAGATAGGGAGAGAGAGACAGAGAGAGA
GAGGCTGGTAATGATTATGAATGAGTATCACATGGATTGTTGGTTTTGTGTGTTCATTTCATCTGAATAAATGAGATGCTTCTGTT
TTTTTATTTTACTGGCACAACAATTCTAGAGACATTTTAATGTACCACATCTTTGACTTTATGGATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAD94402 vacuolar-pyrophosphatase like protein [Arabidopsis thaliana]8381e-087
NP_565195 pyrophosphate-energized membrane proton pump 2 [Arabidopsis thaliana]8308e-087
AAC83018 Similar to gb|D45384 vacuolar H+-pyrophosphatase from Oryza sativa. ESTs gb|F14272 and gb|F14273 come from this gene [Arabidopsis thaliana]8308e-087
AAF31163 vacuolar-type H+-translocating inorganic pyrophosphatase [Arabidopsis thaliana]8308e-087
XP_002887762 vacuolar H+-pyrophosphatase 2 [Arabidopsis lyrata subsp. lyrata]8308e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q56ZN6 Pyrophosphate-energized membrane proton pump 28304e-088
Q9FWR2 Pyrophosphate-energized membrane proton pump 37973e-084
O68460 Pyrophosphate-energized proton pump4155e-040
Q89K83 Pyrophosphate-energized proton pump4102e-039
P60363 Pyrophosphate-energized proton pump4012e-038

TrEMBL top hits (Blast detail)Scoree value
B7FGA7 Putative uncharacterized protein7867e-082
A0MWC0 H+-translocating pyrophosphatase7761e-080
C5YRE5 Putative uncharacterized protein Sb08g0206107761e-080
B8AJF2 Putative uncharacterized protein7643e-079
Q6ER91 Os02g0537900 protein7591e-078

Arabidopsis top hits (Blast detail)Scoree value
AT1G78920.1 AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2); hydrogen-translocating pyrophosphatase8313e-089
AT1G78920.2 AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2); hydrogen-translocating pyrophosphatase8313e-089
AT1G16780.1 vacuolar-type H+-translocating inorganic pyrophosphatase, putative7982e-085
AT1G15690.1 AVP1; ATPase/ hydrogen-translocating pyrophosphatase3932e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
81  33%
 
91  33%

Unigene MembersMember information