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Information for unigene UN04938
| FASTA Sequence |
| Unigene ID: UN04938 | Length: 965 |
SSR | | GGATCCACTTCAGTTCTGTATTCTATAATCATCAAACCTTTAGTGATGATGGCAGCTCCCGTAGTGTTTTCGTTGAGAATTTCATC
TACTCCTAATCATGGGATCAATCGAAATTTTCAACCTTTTCTCCTAACCCAAACAGGAGCTCCTCCTAGATATCGTGCTCTTCGTT
GCCAAGCAAACTCTGAATCTTCCGAACCCAAGGAGAAATTGGTGGTAGATAATGGCTCTACTAGTGAAATTTCACCTGCGTCGAAA
GTAGCGGAACCATCACCTTCTTCTTCTTCTTCTTCTGCGTTTCCTGAGTCTCCAAACAGTGATATTAACAGAAGAGTCGCTGTTGG
TTCTGTTGTTGCCGCTTTGGCCTTGTTTCTATCGACGAGGCTCGATTTTGGGATCTCCTTGAAGGATTTAACTGCTTCAGCCTTGC
CTTACGAGGAGGCTTTGTCGAATGGGAAGTCGACAGTGGTTGAGTTCTATGCTGATTGGTGTGAGGTTTGTCGAGAACTTGCCCCT
GATGTTTACAAAATCGAGCAGCAATACAAGGACAAAGTGAACTTTGTGATGCTAAATGTGGACAACACGAAATGGGAGCAAGAGCT
GGATGAGTTTGGTGTTGAAGGTATTCCTCATTTCGCTTTCCTCGATCGACAAGGGAACGAGGAAGGTAACGTGGTCGGAAGGCTCC
CGAGGCAGTATCTAGTTGAGAATGTCAATGCCCTTGCAGCCGGAAAGCAATCAATTCCTCATGCTCGAGCCGTGGGACAGTACAGC
AGCGCCGAAGCACGCAAGGTTCATCAGGTTACTGACCCCTTAAGCCATGGATAGAAAGAGAGAGAGACATCACAACTTTATAGTGC
ACAAAAAAGATAGACAGTAAGGGGGACAACTGAAAATTAGCAATGTTTCATATTTGTAACTAAATGTTCGGTTTCGTTTTATTACA
TGACTTATAAAAACTCTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195437 thioredoxin-like protein HCF164 [Arabidopsis thaliana] | 1037 | 1e-110 |
| XP_002869014 HCF164 [Arabidopsis lyrata subsp. lyrata] | 1026 | 2e-109 |
| XP_002310771 predicted protein [Populus trichocarpa] | 803 | 2e-083 |
| XP_002522379 Thiol:disulfide interchange protein txlA, putative [Ricinus communis] | 801 | 3e-083 |
| CBI38364 unnamed protein product [Vitis vinifera] | 795 | 2e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23166 Thioredoxin-like protein HCF164, chloroplastic | 1037 | 6e-112 |
| Q7Y0D4 Thioredoxin-like protein HCF164, chloroplastic | 761 | 6e-080 |
| P73920 Thiol:disulfide interchange protein txlA homolog | 329 | 7e-030 |
| P35088 Thiol:disulfide interchange protein txlA | 302 | 1e-026 |
| P38661 Probable protein disulfide-isomerase A6 | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HEG9 Predicted protein | 803 | 1e-083 |
| B9S8R0 Thiol:disulfide interchange protein txlA, putative | 801 | 2e-083 |
| B6UAV4 Thiol disulfide interchange protein txlA | 735 | 9e-076 |
| B8ANT8 Putative uncharacterized protein | 637 | 2e-064 |
| B9F5W3 Putative uncharacterized protein | 637 | 2e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37200.1 HCF164; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 1038 | 4e-113 |
| AT1G21750.1 ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase | 127 | 2e-007 |
| AT1G21750.2 ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase | 127 | 2e-007 |
| AT2G47470.2 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 126 | 2e-007 |
| AT2G47470.1 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 126 | 2e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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