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Information for unigene UN04939

FASTA Sequence
Unigene ID: UN04939Length: 1174  SNP
AGGTCAACATACAAAAAATGATTAACACCATTCTCAATATTTTTCTTCCTCCTCTTACCATCATCTTTCTCTTCCTCTTGTACCCA
TCTTACCTTTTGGGCAAACTTGTGATTCGTCTCTATAAGCACCTGAGCTTTGAAAATGTGGCCAGAAAAGTAGTTCTAATCACTGG
AGCTTCCTCCGGCATTGGAGAGCATGTAGCCTACGAGTATGCAAAGAAAGGAGCGTGTTTGGTTCTCGTTGCTCGAAGAAGGGATC
GTCTAGAGATAGTAGCCCAAAAATCACATCAATTAGGATCTGGTGATGTCCTCGTCATACCTGGTGATGTTGCTAATATTAATGAC
TGCAAGAAGTTAATCGATGATACGATTCATCATTTCGGTAAACTAGACCACTTGATCAACAATGCTGGTGTATTTCAAACTATTCT
TTTCGAAGATTTCACTCAAATTCAAGACGCTAATCCTATTATGGATATTAACTTTTGGGGTTCAACATACATCACTTATTTTGCCA
TTCCTCATCTTCGAAAGAGCAAAGGAAAGATCATTGTGATTACTTCTGGTGCAGCAAATATACCCTTGCCATTGGCGAGCGTCTAT
TCAGCAAGCAAAGCAGCTTTGGTAAGATTCTTTGAGACACTAAGAGTTGAGCTCAGTCCGGATATCAAAATAACAATCGTTTTCCC
CGGAGTTATATCTACAGATATGACCACTCCTCACTTTGTAGAAAAGTATGGTTCAGATTTTTTCCTCTCGGAATCAGTGACTAAAT
GTGCAAAAGCAATCTTCAGAGGAATCGCTAGAGGAGAGACATACATAGAAGAGCCATCTTGGTTAAAATGGATGTTTTTGATAAAC
AGTGTGACTCCTGAAATGTTTGACTACTTAGTCAACTATTTATTTTTTCGTTATCTCAAACCTTATTTCAAGCGTGATTGATCGTA
TTCGTATCAGCCCATTGCTATAATACTCTTGAAAATGGTTGTATTTCAACGGGAAATGAAACTGAACGATACTTTGTTTTTCGTTA
GCTAATTATTATTATTTTTTTTTTTTTTTTTAAGATCATTCATTAGCTAATTATTGCAACCAAGTCTATTAGTTATTACTCTTTTA
TATTTGTTCCAGTTTTCTTCTAGCTAGAGTTTAAGGTATTACACATGACACGATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190320 hydroxysteroid dehydrogenase 3 [Arabidopsis thaliana]13382e-145
XP_002875833 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]13014e-141
NP_190319 hydroxysteroid dehydrogenase 2 [Arabidopsis thaliana]12405e-134
NP_001154667 hydroxysteroid dehydrogenase 2 [Arabidopsis thaliana]10613e-113
ABM90634 11-beta short-chain dehydrogenase reductase [Brassica napus]8803e-092

Swiss-Prot top hits (Blast detail)Scoree value
Q6PUF4 Hydroxysteroid 11-beta-dehydrogenase 1-like protein3102e-027
A4IGM4 Hydroxysteroid 11-beta-dehydrogenase 1-like protein3012e-026
P54554 Uncharacterized oxidoreductase yqjQ2869e-025
Q6QLL4 Corticosteroid 11-beta-dehydrogenase isozyme 12842e-024
Q6PUF3 Hydroxysteroid 11-beta-dehydrogenase 1-like protein2823e-024

TrEMBL top hits (Blast detail)Scoree value
Q9STY7 Putative uncharacterized protein T21L8.11013382e-145
Q9STY8 Putative uncharacterized protein T21L8.10012403e-134
A2TF13 11-beta short-chain dehydrogenase reductase (Fragment)8802e-092
B9IFF2 Predicted protein8013e-083
B9II14 Predicted protein7574e-078

Arabidopsis top hits (Blast detail)Scoree value
AT3G47360.1 AtHSD3 (hydroxysteroid dehydrogenase 3); binding / catalytic/ oxidoreductase13396e-148
AT3G47350.1 short-chain dehydrogenase/reductase (SDR) family protein12411e-136
AT3G47350.2 short-chain dehydrogenase/reductase (SDR) family protein10611e-115
AT5G50590.1 AtHSD4 (hydroxysteroid dehydrogenase 4); binding / catalytic/ oxidoreductase7455e-079
AT5G50690.1 AtHSD7 (hydroxysteroid dehydrogenase 7); binding / catalytic/ oxidoreductase7455e-079

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  29%
 
61  14%
 
74  57%

Unigene MembersMember information