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Information for unigene UN04976

FASTA Sequence
Unigene ID: UN04976Length: 1460 SSR 
GATACTTAAGCTTGTGATAGAGTTACAATTAGGTGGTTGAGAAGATAAACTTGTTGATGAAGAAAAAAAGGGACTGTCTTTTTTTT
TTAAATGTCAGACAGCGCATGAAACCTCATTACAACCAAGTAAATTCATATATCCAAATGGATTAGCGTTTGGTTCGACCGAGTGT
TGTTCTCAGAGTCTCCCAACAATGTCGGAACCTTTGACTCATCGACATCAACCCTAAAACTGTGGTTTTTAGCAACTGTACAAAGA
GGGCATGCACCTGCGCTACGAGCATACACGTGCTCTTCTCCTGCTTCCCTCTTCTTCTGAAGCTACCAACGACAAGGAGGATGTCA
CTTCTCTTTCTGATAAGCATCTCTTGTATGGTCTGAACCCATTTACAGGATAACAGGGTTCTGCGCTCTTCTCCAAGTTCCCCGAA
ACTTTGGTGACCGAGCCATATGCATTAGAACCGGTACAGGACGTTTCCCATACCCCTAGAGATAAAACAGTATCTACATGACTAGA
ATCTTGACCCGTCATTGATTTATGATTAGCACCGCCCTCTCTGGAAGAAGATGTTTTGTTAGATCCTCCTGCAACTAGCACAATCT
TCCCAAAAAGCATAATGCTAGAGATGGGTGTTGAACCGGTTACAGCACCATCCTCTTTAAAAGATTGATTGGATACTGCGTAGTCA
TTCTTCTTATCAATGGACTGGATGTCAGTGGTACATGAGTTAGGAGAGGAGCATCGATTGACCACATCCTCTGTAGCAAACGCTGA
TAGCACAGAAGTTGGAGACTTTGTTTCTTTCTCCATAGCTGAGGAAGGAGACCGAGAGTATGGAACAGGCGATTTTCGAGGATAAG
GATGCGTCGGTTTCCTCTTTGGACGAGGAGGAGGGATCATAATCGAGCCGTCACTACCACTGTCAGCTTCACGAGCCACCTTGGAG
AAAAACTTTTGAGCATGGCTTCTGATCTGAATAGCTGTTTTCGTACCTATATGTTCTTGGATTTGACGCCAAGCACGACCGTAAAG
CTGTATAGCTTCAATGAACCTCTCATGCTCTTCCTCACTCCACTTCTCTCTCTGCTTAGATACTGTATACGGCTTTCTAACCTTAG
AGAACAACACACATACAAAGTTCAGACAATTGAAAAAAAAGAAAGAAAGAAAGAAAGAAACTTTCTCCCACGATGGAACTTGTCTT
AACAAATTATAGCTGATATACCTTAGCAGCGTTTGCGATCCGATCACTACTGGTTTCATGATTGGTTCCTTCATTTGAATTGCAAC
TTCCATTCTCTACATTGCTAATTACATCCTCACTTCGATCCGGAGCAGCCATGTAACGGTATCTAATAAGCTTTCTTCAGATCTCA
GGACAGTGAATAGAAAAAAGTGGAGAGTAATTCCTGCTATTTTCACGAGAAATCAGACCGATTATCTCTGAGAAAGTGAAGCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABL97969 EPR1 [Brassica rapa]10354e-110
AAF25987 F15H18.16 [Arabidopsis thaliana]9271e-097
NP_683543 myb family transcription factor [Arabidopsis thaliana]8832e-092
NP_173269 early-phytochrome-responsive1 [Arabidopsis thaliana]8787e-092
NP_001117304 early-phytochrome-responsive1 [Arabidopsis thaliana]8787e-092

Swiss-Prot top hits (Blast detail)Scoree value
P92973 Protein CCA13631e-033
Q6R0H1 Protein LHY3631e-033
Q54IF9 Myb-like protein G2798e-024
Q54Z40 Myb-like protein H1418e-008
Q869R9 Myb-like protein J1391e-007

TrEMBL top hits (Blast detail)Scoree value
A1YN10 EPR110353e-110
Q9LPQ1 F15H18.169279e-098
Q3EBA1 Putative uncharacterized protein At3g10113.18831e-092
B3H5A8 Uncharacterized protein At1g18330.28785e-092
Q8VZP5 MYB transcription factor8785e-092

Arabidopsis top hits (Blast detail)Scoree value
AT3G10113.1 myb family transcription factor8836e-095
AT1G18330.1 EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor8782e-094
AT1G18330.2 EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor8782e-094
AT5G37260.1 RVE2 (REVEILLE 2); DNA binding / transcription factor4501e-044
AT5G17300.1 myb family transcription factor4321e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  40%
 
91  20%
 
61  20%
 
121  20%

Unigene MembersMember information