RadishBase

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Information for unigene UN04983

FASTA Sequence

Unigene ID: UN04983	Length: 1328	SSR
GGGAGAGCTACATGGAATTGGAGTAAACAAAAAAAAAAAAGCTTTGAGATTTCTTTCCTCTTTATCAGCGAAGAATCGTTCGTTTG TTTCCTTCCTTCCTTGTTGTTCTGGAATCTGAGTTTTTGTTTTCGGAGTCTTCGAGGTTTCTTCCTCATTCGTTTGCTGCTTCCCA TCGAAACTCTCTTCTGGTGGAATCTGAGTTCTAGTTTTGCGGTTTTTTCTGCTGGGATTTGAGCAGAAAGCCAAGTTTGATGTTTT GTTGAAGTATCCACGAGTTTTATTCTGTTGGAAGCTCCTCTTTGTGTGATTGAAACGGAGAGAGAGAGAATGATTTTACCAAAGCA GTATCGCTGCACACACTCCCCGACCTGCCAGTGCACGAGAGGCCATCTAAGCGAAGACGTGCTGTTACTAGTCTTCCAGCATTTGA ACTGGAACCCTAAACTAGTCGCAACACTCTCCTGCGTGTGCAAATGGTTCGACGATTTCGCCAAACGTGTCCTATGGAAAGAGTTC TGCAAGACTCGCGCGCCAAGCTTCTCATCTACTGCTCAGGATGCACACAAGGCGGTCTTTTCAACAGCACCGTTCAAATCCCTGGC CACTTCGTTTACAGAACAAGATTCTCGAGAACATTAGGGAGAAGCCTACCGCCGCCTCAGTGTAGAACTGGTGTTCTCTACGTTAG TGATCCGTGCGAGCATCTTGATCAAGGAGAAGAAGGAGACGTGGGTTTGTTCCGTGGGATTTTCAAGTCGTTCCCAACGTCTAGAG TCAGGAAAGTTATCATTAACAAGGCGGTTCCGTTTCATCCCTTTGAGGTTTGTCCGTACTGCAAAGCTAAACTGTGGAGCATGCTC CAAGCTAAGATCATACCCCAGAGTGCTTGCGTTCGTTTGGAAGCTTATGAGGACTGCATTGAGTATTTCGTTTGCCTTAATGGGCA TTTGGTTGGTATTTGCACTCTGGCTCCTTTGTCTGATTTTGAGGAGGCGGTTCCAAGTGAAGATAGCAATCACACAGAGAAGAAAC AAGACAATTGCTTGGGTAAAGAGAATGGATTGAAAAGGAGACATTCTTTATTGGGTGGAAGTGAGAATGGTGGACCTTCTCCTCAA AAACGGCTGACCATTTCGAATCAATGTGACATTGATGTGTGAAAAACCGTCTGTAAATTTGTTGTTGTTTTGTGTGATTCTTACTA ACTATATTTGCATCCTCAGAGATTCATTCATTTACAGTCAGGTTATGATCAACGGTTACCATAATCTCTGGTTATGATTTTTTTTA ACTCGCATTGAGATGAATGTTATCATTGTGTTCTGTCG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002871666 hypothetical protein ARALYDRAFT_909515 [Arabidopsis lyrata subsp. lyrata]	985	2e-104
NP_197048 EID1-like F-box protein 1 [Arabidopsis thaliana]	961	1e-101
ACU20189 unknown [Glycine max]	671	6e-068
XP_002284224 PREDICTED: hypothetical protein [Vitis vinifera]	668	1e-067
CAN69516 hypothetical protein VITISV_009953 [Vitis vinifera]	667	2e-067

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q9LF38 At5g15440	961	9e-102
C6TED7 Putative uncharacterized protein	671	4e-068
A5AYX9 Putative uncharacterized protein	667	1e-067
C6TAM8 Putative uncharacterized protein	666	2e-067
B9SJA3 Putative uncharacterized protein	654	4e-066

Arabidopsis top hits (Blast detail)	Score	e value
AT5G15440.1 EDL1 (EID1-like 1)	966	1e-104
AT5G39360.1 EDL2 (EID1-like 2)	629	2e-065
AT3G63060.1 EDL3 (EID1-like 3)	365	7e-035

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	2			67%


10	1			33%

Unigene Members	Member information