RadishBase

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Information for unigene UN05021

FASTA Sequence

Unigene ID: UN05021	Length: 848		SNP
AATAAAGGGAGCGGTTTAGATACATTCATCTCTCTCCCTTTTTAGTCCTATATAACATTCGAAGCTACCACTCTTCATCTGACTCT AAAAACTAATCTCAAGTTTGATCAAGAAATTCAAGAAAGATGCCTAAAGATAGGAAGATCGGAATCGCGATGGACTTCTCGGAGAG CAGCAAGAATGCACTGAAATGGGCATTTGAGAACTTAGCTGATAAAGGAGACACACTTTACATCATCCACACGTTATCAACCTCTG ACGTTGACTCTCATAACTCTGCCTGGCTCCAATCCGGTTCTCCTCTCATACCGTTGGTGGAGTTTAGGGAACCGGAGATCATGGAG AAATATGGTGTCAAGATTGATATCCCAGTTCTTGACATGCTTGACACTGGTTCAAGGCAGAAAGAGGTGCATGTAGTGACGAAATT ATACTGGGGAGATGCAAGAGAGGCGCTGGTCGATGCTGTTGAAGATCTCAAACTTGATTCTATTGTCATGGGAAGCAGAGGACTCA GTGCCCTTCGAAGGATAATAATGGGAAGCGTGAGCAGCTTCGTGATTCAGCATGCTCCTTGCCCCGTCACCGTTGTCAAGGATAAC GACTCTCACTAAATTATGATGTCTTTATCTCATATGTTTTTACAAAATCCATCATCGCTGCTTATGCTTTTTAATTAAAGAATAAA AGTACCTTTTTCTCGGTTGTATTTTGTTTCGGTATTCGAATTCATATGAATACGTTATTGCTTCGTATATTTGTCAAGTATCTTAG GTGTGTTTGGTGGACTCACTCTTATGTGATTTACATATCAACATGTCGTGAGATCATTTAAATAATTTGTATAT

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002877951 universal stress protein family protein [Arabidopsis lyrata subsp. lyrata]	746	6e-077
ABL97944 hypothetical protein [Brassica rapa]	717	1e-073
NP_566991 universal stress protein (USP) family protein [Arabidopsis thaliana]	716	2e-073
ACU14311 unknown [Glycine max]	631	1e-063
ACU14717 unknown [Glycine max]	622	1e-062

Swiss-Prot top hits (Blast detail)	Score	e value
Q8LGG8 Universal stress protein A-like protein	127	2e-006

TrEMBL top hits (Blast detail)	Score	e value
A1YMY5 Putative uncharacterized protein	717	9e-074
Q9M328 AT3G53990 protein	716	1e-073
C6SYI8 Putative uncharacterized protein	631	9e-064
C6SZP4 Putative uncharacterized protein	622	1e-062
B7FGP5 Putative uncharacterized protein	612	1e-061

Arabidopsis top hits (Blast detail)	Score	e value
AT3G53990.1 universal stress protein (USP) family protein	716	7e-076
AT3G03270.2 universal stress protein (USP) family protein / early nodulin ENOD18 family protein	441	6e-044
AT3G53990.2 universal stress protein (USP) family protein	412	1e-040
AT3G17020.1 universal stress protein (USP) family protein	366	3e-035
AT3G03270.1 universal stress protein (USP) family protein / early nodulin ENOD18 family protein	363	6e-035

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


8	4			44%


20	1			11%


12	1			11%


9	2			22%


10	1			11%

Unigene Members	Member information