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Information for unigene UN05034
| FASTA Sequence |
| Unigene ID: UN05034 | Length: 1471 |
SSR | | GGAGTGTGTTTTCCGCGGTCGTTTCCTTTCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTACGGAAAATTCGCATCT
GAACTCAGAAACCCTCGCAATTCGTTCGTAGCTCTTTATTCATTTCCGTCTGAGCAATGGCTTTGGTTCTACACACTTACAAGGGA
AACAAAGGTGCCTACAAGGCACTCATCGCTGCAGAGTATGCAGGTGTCAAGATCGAGGAGTCCTCCAACTTTCAGATGGGCGTCAC
CAACAAATCTCCCGAGTTTCTCAAGATGAACCCCATTGGAAAGGTTCCCGTGCTTGAGACTCCACAAGGTCCCATCTTTGAGAGCA
ATGCCATCACCCGATACGTGAGCCGTGTGAATGGTGACATCCCTTTGAATGGATCATCCCTCATTGATTACGCTCACATTGAGCAA
TGGATTGATTTTGCCTCGTTGGAGATTGATGCTAACATGCTGAGGTGGTTCGCTCCAAGGATGGGCTATGCTCCTTTCTCTGCTCC
TGCTGAGGAAGCTGCTATTGCTGGATTGAAGAGAGGACTTGATGCTCTTAACACCCATCTCGCCTCCAACACTTACCTCGTTGGAC
ACTCTGTTACCCTCGCTGATATTGTAACCATCTGCAACTTGAACTTGGGATTTGCCACCGTGATGACCAAGAGCTTCACCTCTGAG
TTCCCTCATGTTGAGAGATACTTCTGGACAATGGTCAACCAACCCAACTTCAAGAAGGTGATTGGTGATGCCAAGCAGACCCAAGC
TGTCCCTCCTGTTCCTTCTAAGAAAGCTGCACAGCCCAAGGAGGAGCCTAAGAAGCCTGCCCCTGCAGCAGAGGCACCCAAGTTTG
CTGAGGAGGAAGAAGCACCGAAGCCCAAGGCCAAGAATCCTCTTGATTTGCTACTACCTAGCCCAATGGTTCTTGATGAGTGGAAG
AGGCTTTACTCCAACACCAAGTCCAACTTCCGCGAGGTTGCAATCAAAGGATTCTGGGACATGTACGATCCAGCGAATGGACTTGG
CACGTAAATACGCATTTGGAAAGATGCTCATTTGCGGGTCAGAGGCTCCTTTCAAGGTGAAGGGTTTGTGGCTGTTCCGTGGACCA
GAAATCCCCAAATTCATTATGGATGAGGTCTACGACATGGAGCTCTACGAGTGGACCAAAGTTGATATCTCTGACGAAGCACAGAA
AGAGCGTGTTAGCCAGATGATTGAAGATGCCGAGCCTTTTGAAGGTGAGGCCCTTTTGGACGCCAAGTGCTTCAAGTAAGAGATGC
TCTTCTTCACTCCCACCTCTATCTCCACAGGGTGCTTACTCTGTTACTAGTGTTTTGATATCTTCTAGAGTCCTTGCAACCTCTTA
ATCGTAGAGTTTTTCTGGGATTTAACAACTGCTCTTTTGTGACAGAATTGCTTAAAACTCTTTCTATGTTGTCATCTTTCTATTGG
TTTACATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892012 hypothetical protein ARALYDRAFT_474857 [Arabidopsis lyrata subsp. lyrata] | 1383 | 2e-150 |
| NP_176084 elongation factor EF-1 gamma subunit [Arabidopsis thaliana] | 1381 | 3e-150 |
| AAK59587 putative elongation factor 1B gamma [Arabidopsis thaliana] | 1381 | 3e-150 |
| BAH56923 AT1G57720 [Arabidopsis thaliana] | 1381 | 3e-150 |
| XP_002889762 hypothetical protein ARALYDRAFT_471063 [Arabidopsis lyrata subsp. lyrata] | 1286 | 3e-139 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FVT2 Probable elongation factor 1-gamma 2 | 1381 | 1e-151 |
| O04487 Probable elongation factor 1-gamma 1 | 1280 | 7e-140 |
| Q9ZRI7 Elongation factor 1-gamma 1 | 1148 | 1e-124 |
| Q6YW46 Elongation factor 1-gamma 2 | 1135 | 4e-123 |
| Q5Z627 Elongation factor 1-gamma 3 | 1099 | 7e-119 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z2J4 AT1G57720 protein | 1381 | 2e-150 |
| B9DHI9 AT1G09640 protein | 1280 | 1e-138 |
| Q0E2Q6 Os02g0220600 protein | 1148 | 2e-123 |
| B7SDI2 Elongation factor 1-gamma | 1139 | 2e-122 |
| B8AE83 Putative uncharacterized protein | 1139 | 2e-122 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G57720.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1381 | 1e-152 |
| AT1G57720.2 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1381 | 1e-152 |
| AT1G09640.1 elongation factor 1B-gamma, putative / eEF-1B gamma, putative | 1280 | 6e-141 |
| AT2G30870.1 GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10); copper ion binding / glutathione binding / glutathione transferase | 168 | 5e-012 |
| AT2G30860.1 ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase | 147 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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