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Information for unigene UN05040

FASTA Sequence
Unigene ID: UN05040Length: 1124 SSR 
TTTTTTTGCTATCGTCGTCAAGAGCCAGAGAGAGAGAGAGAGGAATCGGTTGTGTGTTGTCGAAGCTTCTTGGCTCCCTCTTCTCT
TGTTAACGCGCTTATCTCATCTGCGATCTCTCGTTGATCAGAGGATTTCCCGAGCTTCAGAGATCAACAATCATGGCCACCGCTGG
AGGAAACAAGAACATCAACGCCAAATTGGTATTGCTTGGGGATGTTGGAGCTGGAAAATCTAGTCTTGTGCTTCGATTCGTCAAAG
ATCAGTTTGTTGAATTCCAGGAATCACCGATAGGTGCAGCCTTCTTCTCTCAAACATTGGCTGTCAATGATGCAACTGTCAAGTTT
GAGATTTGGGATACTGCTGGTCAGGAACGTTACCATAGCTTGGCTCCTATGTACTACCGGGGTGCTGCTGCTGCCATTATTGTCTT
TGACATCACTAATCAAGCCTCATTTGAGAGGGCTAAGAAATGGGTTCAGGAACTTCAGGCACAAGGTAACCCTAATATGGTGATGG
CTCTTGCTGGAAAGACATCTTTTACGAAATCGCAAAAAGGCTACCACGTGTACAGCCAGCAGAAAACCCAGCAGGAATGGTTCTCC
CAAGCGGGCCAGCAGCTACTGCAGTGAGTAGTTCATCATGTTGTGCTTAAGAGAGCTCTCTCTCTTGGTTAGTCACTGTAGAAAGG
AAACATCCAGTCAGTGCCGGTCCCAGCATTTTGTGGGCTGGAAGCTAAAATAATATATTGGGCCTGTTGATTAACACATTTAAGAG
ATAAATAAGGAAATATTGATTTGGGCAAAGAAATATTCGTAACTCATGACCTGTTCTCAGGGCAGTAGTAACCACAACCAACTCAA
CTAACAGACAACTAAAACAAATCGCGGCCGAAATTCTATTTATTTTTGGTCGGCCGGAAGCAGCTGCTTCCTTTGCTTACTTTCAA
GGCCGGCTCTGCATCCAGTCTCTTTATGTGTTTTCTTCTTGTCTTAACGTTGTCGCTTTGCTTTGCATTGTATATCAAGATGTTTC
CGCTCTGTGGAAATCTAAAGATACTTGTATTTGAAGAGGTTTGATTTGTAATTAGATATCACAACTTACTATGCGTGTGATCGCTT
CTCTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199326 Ras-related protein RHA1 [Arabidopsis thaliana]5919e-059
NP_193699 Ras-related small GTP-binding family protein [Arabidopsis thaliana]5919e-059
2EFC Chain B, Ara7-GdpATVPS9A5919e-059
XP_002888398 predicted protein [Arabidopsis lyrata subsp. lyrata]5919e-059
XP_002867930 hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp. lyrata]5882e-058

Swiss-Prot top hits (Blast detail)Scoree value
P31582 Ras-related protein RHA15914e-060
P31583 Ras-related protein RHN15181e-051
P29687 Ras-related protein Rab55054e-050
Q0IIG7 Ras-related protein Rab-5A4435e-043
P18066 Ras-related protein Rab-5A4435e-043

TrEMBL top hits (Blast detail)Scoree value
Q9SN68 AT4g19640/F24J7_1905916e-059
B9RRP3 Putative uncharacterized protein5819e-058
B9NA46 Predicted protein5763e-057
A9P9C3 Putative uncharacterized protein5702e-056
B9ICG5 Predicted protein5702e-056

Arabidopsis top hits (Blast detail)Scoree value
AT4G19640.1 ARA7; GTP binding5913e-061
AT5G45130.1 RHA1 (RAB HOMOLOG 1); GTP binding5913e-061
AT1G16920.1 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding2922e-026
AT4G18800.1 ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding2903e-026
AT1G06400.1 ARA-2; GTP binding2893e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information