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Information for unigene UN05043
| FASTA Sequence |
| Unigene ID: UN05043 | Length: 1124 |
| SNP | GGATCACACGAAACCCTCTTACTTCTCCACATTGACAGAAATATCCATCTGCTTCTGTTCACTTCTTTTTTCCTTCTCCTTTTGCA
TGTTGTAATTGTTTTGCTTCATCATGGGGGTTTTAGTAATCTCGGCTCTCCTACTCCATGTGCTATCGTTTTCTGTTTGCGTTCAA
GGCTTCTACCGTCGTGGCGGCCACCATCCCGGCCCACATGGGACCTTGGATCAATGCTCATGCCACATTCTACGGTGGCGGTGATG
CTTCTGGCACTATGGGTGGAGCTTGCGGGTACGGGAATCTATACGGCCAAGGCTATGGAACAGAGACTGCCGCGCTGAGCACGGCG
TTATTCGATAACGGACTTAGCTGTGGTGCCTGCTTCGAGCTTAAGTGTGTCAACGATCCTCAGTGGTGCATACAAGGCCGGTCCAT
TGTGGTCACTGCCACTAACTTTTGTCCTCCTGGTGGCGCCTGCGATCCTCCTAACCACCATTTCGATCTTTCTCAGCCCATCTACG
AGCACATCGCTATTTACAAGTCCGGTATCATTCCGGTTATGTACAGAAGGGTACGGTGCAGGAGAAGCGGTGGGATAAGGTTCACG
ATCAACGGTCACTCATACTTTAACTTGGTGCTGGTCACAAATGTCGGTGGAGCCGGGGATGTACACTCTGTGTCAATGAAAGGGTC
GAGGTCAAAATGGCAATTAATGTCAAGAAACTGGGGGCAAAACTGGCAGAGCAACTCTTATCTCAATGGTCAGAGTCTGTCGTTTG
TTGTCACCACAAGTGATCGCCGAAGTGTCGTGTCGTTCAATGTTGCTCCTCCCGGTTGGTCCTTTGGCCAGACCTACACCGGAGGG
CAGTTTCGGTACTAACTTATATAAAAGTGGTTTATATAGTAAACCGGTTTGGTTCGCTTGGTTTTAGTAATTGCATCTTTTTGTAA
TTTTTGGTTCCAAGTTGGGGACCTTTTTTTGGGGGTAACCAATTAATATCAGGACTGGTAATGTATGTAGCTAAATGTGTGTGAAG
TGTGAACGAGAGAAGGAAACAGATACTTCTCATTTTATATAAGAAAATGAAAGTAATATTAAATAATATTAAAAAGAAGAGAAATT
AGGACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189545 expansin A5 [Arabidopsis thaliana] | 1181 | 3e-127 |
| XP_002877151 ATEXPA5 [Arabidopsis lyrata subsp. lyrata] | 1161 | 7e-125 |
| XP_002306037 hypothetical protein POPTRDRAFT_556331 [Populus trichocarpa] | 1083 | 8e-116 |
| XP_002533125 Alpha-expansin 5 precursor, putative [Ricinus communis] | 1072 | 1e-114 |
| CAC19183 alpha-expansin [Cicer arietinum] | 1064 | 1e-113 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1ECM3 At3g29030 | 1181 | 2e-127 |
| B9H0D0 Putative uncharacterized protein PtrEXPA6 | 1083 | 5e-116 |
| B9T4F6 Alpha-expansin 5, putative | 1072 | 1e-114 |
| Q9FNT1 Alpha-expansin | 1064 | 8e-114 |
| Q8LKK1 Alpha-expansin | 1060 | 2e-113 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G29030.1 EXPA5 (EXPANSIN A5) | 1182 | 1e-129 |
| AT1G26770.1 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall | 980 | 3e-106 |
| AT1G26770.2 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall | 980 | 3e-106 |
| AT1G69530.1 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 946 | 2e-102 |
| AT1G69530.2 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) | 946 | 2e-102 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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