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Information for unigene UN05076

FASTA Sequence
Unigene ID: UN05076Length: 758 SSR 
CAGAAACAAGAAAAACAAAACACGAAGTTTTCGTTTGAGAGCTCAAAGGTTCCAGATTTCAAAAGAGCTTCTTTTTTTTTTTTTTC
CAGAATCATTTCTAGATCAATAGGCGGTTCTGTCATTGGTGAGAAGATGTCGGATCATCTGAGTTTATGTACGGATCGTCTCATAA
CGGGTGAGAGCTTGGAGTCAGAAAAGGATTGTGGAGAAAGTTCTTGTCCTCAAGGCGTCAGAGATGTGGCTTCTTCTTCTTCTTCT
TCGTCTGCGTCTGTCGATGAAGCTGAAGATGCCAGGAAGTACTATGCTGTTGTTGCTGCAGAAGAGGAACCGCTTCTCCAGTCTGT
TGAGTGCCGTATTTGCCAGGAGGAAGATATCACTAACAACTTGGAGGCTCCTTGTGCTTGCAATGGCAGTTTGAAGTATGCGCACC
GCAAGTGTGTTCAGCGTTGGTGTAATGAGAAAGGCGACATTGTCTGCGAAATATGCCACCAGCCTTATCAATCTGGATATACAGCA
CCTCCACCTCCTCCTCCTGATGAAACTATAATTCACATTGGTGAGGATTGGGAGACTGGAGTTCACTTGGACTTGAGCGACCCGCG
CATTCTAGCAATGGCTGCAGCGGAACGTCATTTCTTGGAAGCTGACTATGACGAGTACACCGAGTCTAACTCGAGCGGTGCTGCCT
TCTGTCGTTCTGCTGCTCTCATCCTGATGGCACTTTACTGTAAGAGATGCACTAAACTCACGACTAATCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADA67984 RING-type E3 ubiquitin ligase [Brassica napus]8836e-093
XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8381e-087
NP_850668 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]8182e-085
NP_850667 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]8182e-085
NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]8182e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q32L65 E3 ubiquitin-protein ligase MARCH21395e-008
Q86UD3 E3 ubiquitin-protein ligase MARCH31379e-008
Q8BRX9 E3 ubiquitin-protein ligase MARCH31379e-008
Q5XIE5 E3 ubiquitin-protein ligase MARCH31379e-008
Q86YJ5 E3 ubiquitin-protein ligase MARCH91379e-008

TrEMBL top hits (Blast detail)Scoree value
D2KC47 RING-type E3 ubiquitin ligase8834e-093
A9CEI2 Uncharacterized protein At3g47550.28181e-085
Q3E6V0 At3g475508181e-085
Q9SN83 Putative uncharacterized protein At3g475508181e-085
Q9FJJ6 AT5g62460/K19B1_76953e-071

Arabidopsis top hits (Blast detail)Scoree value
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein8189e-088
AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein8189e-088
AT3G47550.1 zinc finger (C3HC4-type RING finger) family protein8189e-088
AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein8189e-088
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein6952e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
101  33%
 
111  33%

Unigene MembersMember information