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Information for unigene UN05115
| FASTA Sequence |
| Unigene ID: UN05115 | Length: 884 |
SSR | | CAGAGAGACGATCTTGATGATGATGTTGTTGTTGTTGTTGATGATGGGAGATGTTACTGGAAGTTAGTGGTTTGGTTTGTTACTTT
GCCTCTCTACTTGCCTAGGAGATTGACTATACCTGTCGTGAGTGAAGACAGATGGTCTAAACCGATAGCTGTTGCTTCGGTTACGT
TTGCTCCGGTTCTCTTGTCGTTTCTATGGAACTGGAAGCGGAATCCGACAAGTTTCGAGGTGGAGGTTGTTTATCTAGTTGGATGT
TTGGTCGGTATAGTTCTTGGTTTTGTCGCAGGAGCCACGACGAAGAAGTCAAACCCGCCAAAGAAGTGGTTACTACCTTGGTTAGC
TGGAGGGTTTGTGATGAGCATGACGTGGAGTTACATATCAGCGCAAGAGCTGGTCGCGCTTTTGACTTCGCTAGGTTACATCTTCG
GTGTAAGCCCTTCGATCTTGGGCCTCACGGTTTTCGCTTGGGGGAACTCGATAGGAGATCTTATAACCAACGTGACGATGGCGCTG
CACGATGGGGACGAAGGAGCTCAGGTGGCTGTGTCGGGATGTTACGCTGGTCCTATCTTTAATACGTTGTTTGCTCTAGGGGTGTC
GCTTGTGGGATGCGCGTGGGAGATTTATCCGTCGAGTATTGTGATAAAGACGGATCCTCGCGTGTTGGAGAGTCTTGGGTTTCTGG
TGGTAGGACTGGTTTGGTCGTTCTTGGTTCTGTTTAGTAATAGAATGAGGCTTGGTGGTGTGATGGGTATAGGGCTTTTGGTTATT
TACTTGGCTTCGTTGTCTATAAGAATTGTACAAACAGTTGGAGATTCTCACTAACCTTTTGATTTCAACTCACAGTTTCATATGTA
ACTTGTGTAACTGTGTTTGTACTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197287 Sodium/calcium exchanger family protein [Arabidopsis thaliana] | 1215 | 3e-131 |
| XP_002525681 Sodium/potassium/calcium exchanger 6 precursor, putative [Ricinus communis] | 845 | 2e-088 |
| XP_002319728 Ca2+ antiporter/cation exchanger [Populus trichocarpa] | 823 | 7e-086 |
| XP_002319727 Ca2+ antiporter/cation exchanger [Populus trichocarpa] | 819 | 2e-085 |
| ADB95945 cation exchanger 8 [Cucumis sativus] | 757 | 3e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SYG9 Cation/calcium exchanger 4 | 654 | 1e-067 |
| Q9LJI2 Cation/calcium exchanger 3 | 625 | 3e-064 |
| Q6J4K2 Sodium/potassium/calcium exchanger 6 | 280 | 3e-024 |
| P34315 Putative sodium/calcium exchanger 6 | 251 | 7e-021 |
| P87122 Putative cation exchanger C3A12.06c | 251 | 7e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FKP2 Na/Ca,K-exchanger-like protein | 1215 | 2e-131 |
| B9SI62 Sodium/potassium/calcium exchanger 6, putative | 845 | 1e-088 |
| B9I644 Ca2+ antiporter/cation exchanger | 823 | 5e-086 |
| B9I643 Ca2+ antiporter/cation exchanger (Fragment) | 819 | 1e-085 |
| D3JV40 Cation exchanger 8 | 757 | 2e-078 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G17850.1 cation exchanger, putative (CAX8) | 1216 | 8e-134 |
| AT5G17860.1 CAX7 (calcium exchanger 7); calcium:sodium antiporter/ cation:cation antiporter | 709 | 5e-075 |
| AT1G54115.1 CCX4 (CATION CALCIUM EXCHANGER 4); cation:cation antiporter | 654 | 1e-068 |
| AT3G14070.1 CAX9 (CATION EXCHANGER 9); cation transmembrane transporter/ cation:cation antiporter/ manganese ion transmembrane transporter/ potassium ion transmembrane transporter/ sodium ion transmembrane transporter | 625 | 3e-065 |
| AT1G08960.1 CAX11; calcium:sodium antiporter/ cation:cation antiporter | 298 | 2e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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