RadishBase

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Information for unigene UN05181

FASTA Sequence

Unigene ID: UN05181	Length: 652	SSR
GATTATGGAAAACAAATGGTTAGATAAATGTATTGTAAACATTTTCTTCCTAACATACAGTTTTCAAGATATATTTACATAAAAGT GTGACATATGTATATTAGATTTAATGTGTCAATCTGTGTTGTTTCAAAAATGAAAAGTTGAAACAATTTCTTTTCATGTTGAAAAT GTGCTCAAAGATGACTTCTGAGAAAAAAAAACTTTTGAAAAGATTTCACCCTTCATCAGAAGAACCGTGGTCTTCTTCCTTTGGTT CAAACCTATTCAAAGACGACTCGCCTGCATCATCATCATCATCATCATCATCATCTGAATAAATACTTTGGGCTTCAGATTTTGAG CTTTGAACGTGCTCAAGCCGAGTTTCATGATTCTCATCCTCATCTTCCTCCTCCTCCTCATCATCATCACTATGATCATCATGAGC AATACTTGTGTTCTTTGGCTCGCTGTCATACCGGAAAGAAGTGCATTCGTTGTCTGATTTACAGCTGCTTTTACTGCTTAGCCTCT CGTTATCTTCTTCTTCCTCTTCCTCAGAGCTGTAACTGTATTTTATCTCCGAACTCTGTGCATTTGCGTTACTTTCATCAATGGGA CTTTCTCTCTCGCTTCCAGAGTCAGAGGAACTGCTCCTAGAAGCGCTTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
CBK21306 unnamed protein product [Blastocystis hominis]	175	6e-011
EGW34628 hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum NRRL Y-27907]	170	2e-010
XP_452713 hypothetical protein [Kluyveromyces lactis NRRL Y-1140]	164	1e-009
CBK20048 unnamed protein product [Blastocystis hominis]	161	2e-009
XP_002498615 ZYRO0G14608p [Zygosaccharomyces rouxii]	159	4e-009

Swiss-Prot top hits (Blast detail)	Score	e value
P32583 Suppressor protein SRP40	155	6e-010
Q9P785 LisH domain-containing protein C1711.05	154	7e-010
P27476 Nuclear localization sequence-binding protein	151	2e-009
P41891 Protein gar2	144	1e-008
P13816 Glutamic acid-rich protein	136	9e-008

TrEMBL top hits (Blast detail)	Score	e value
Q1PDW3 Protein kinase family protein	275	1e-022
Q9FFD4 Protein kinase-like protein	275	1e-022
C5MDZ8 Putative uncharacterized protein	177	2e-011
B6JZT5 Predicted protein	169	2e-010
C5E0P8 ZYRO0G14608p	168	3e-010

Arabidopsis top hits (Blast detail)	Score	e value
AT5G16500.1 protein kinase family protein	275	7e-025
AT3G02810.1 protein kinase family protein	244	3e-021
AT5G55040.1 DNA binding	142	2e-009
AT5G55040.2 DNA binding	142	2e-009
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding	119	8e-007

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	3			100%

Unigene Members	Member information