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Information for unigene UN05298
| FASTA Sequence |
| Unigene ID: UN05298 | Length: 1796 |
SSR | | GGAAACACACACACACTCCATTTCACACAACCTCGTACTTATCGCCTTCCCTCTCTCCTTCTCTGAGATCCGCCATGCAAGCTCTT
CAATCCTCTTCCCTCCGCTCTTCTCCGCCGAACCCACTCATCAAACCTTCGAACCGCCAGTCCCACCAAATCACCAATGCGAGACA
ACAACCCGCCTGGAGGAGGAGACGCTCGTTCATCTCCGCATCAGCCGTCTCCGCTCCGAAACGCGAGACGGATCCGAAGAAACGCG
TCGTGATAACCGGGATGGGTCTCGTCTCCGTCTTCGGGAACGACGTCGACACTTACTACGTGAAACTGCTCTCCGGCGAGAGTGGG
ATCAGCTCGATCGATCGGTTCGATGCGTCCAAGTTCCCGACTCGGTTCGGCGGACAGATCCGCGGGTTTAGCTCGGAGGGTTACAT
CGACGGGAAGAACGAGCGTAGGCTTGATGATTGCTTGAAGTATTGCATTGTTGCTGGGAAGAAGGCTCTTGAAAGTGCTCATCTTG
GTGGTGATAAGCTTAACACGATTGACAAGTTGAGAGCTGGAGTACTAGTTGGGACTGGTATGGGTGGTTTGACAGTGTTTTCAGAC
GGTGTTCAAGCTTTAATGGAGAAAGGTCACAGGAGGATTTCTCCGTTTTTTTTCCTTATGCTATAACAAACATGGGTTCTGCTTTG
TTGGCGATTGATCTTGGTCTTATGGGTCCAAACTACTCCATCTCGACCGCTTGTGCCACTTCTAACTACTGCTTCTACGCTGCTGC
GAACCACATTCGGCGTGGGGAAGCTGATATGATGATTGCTGGTGGAACAGAGGCTGCTATCATTCCTATTGGCTTGGGAGGTTTTG
TTGCTTGCAGGGCGCTTTCGCAGAGGAATGATGACCCTAAAACGGCTTCAAGGCCATGGGATAAACAGAGAGATGGGTTTGTCATG
GGTGAAGGTGCTGGTGTTCTGGTGATGGAAAGCTTGGAACATGCGATGAAACGTGGGGCTCCAATTGTAGCGGAATATCTAGGAGG
TGCTATTAACTGTGATGCTCATCACATGACTGATCCAAGAGCTGATGGGCTTGGTGTCTCTTCATGCATTGAGAGCTGCCTTGAAG
ATGCTGGTGTATCACCCGAAGAGGTAAATTACATCAATGCACATGCAACTTCCACACTAGCTGGTGATATTGCTGAGATTAATGCC
ATTAAAAAAGTATTCAAGAGCACTTCAGGGATCAAAATCAATGCCACCAAGTTTATGATAGGTCACTGCCTCGGTGCAGCTGGAGG
TCTTGAAGCCATCGCCACCGTGAAGTCTATCAACACTGGATGGCTTCATCCCTCAATCAACCAATTTAACCCAGAACCAGCCGTGG
ACTTTGACACGGTGGCAAACGAGAAGAAGCAGCATGAAGTGAACGTTGCGATATCAAATTCGTTTGGGTTCGGTGGACATAACTCA
GTTGTCGCCTTTTCTGCCTTCAAACCCTGATTCCTTCAAAGACCTTTTTTGTATTTTTTGCTCCAACTGTTACAACACCACCATCA
TCATCCATCACTATCCTCCTCCTCCTTGGAGCTTTTTGTTCCACGAGTTTGGGCTCTTTCTTTGGCGTTTTTTACGTTCTATTCAA
CATTGTTTCATTGAGCCGTTGAGATTTCAGATTTTGCTTCTCAATCCTAAGAAATGTTTGTATCTGTAATCTTAGTTCGTTTCATA
TTTGTCTGATTTATAAACAGAACCATGAATCTTGTAGCAATGATGTTATTATCAGAAAGGAAGGAAGCTCTCAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199441 3-oxoacyl-[acyl-carrier-protein] synthase I [Arabidopsis thaliana] | 1412 | 1e-153 |
| XP_002863412 kas I [Arabidopsis lyrata subsp. lyrata] | 1409 | 2e-153 |
| AAC49118 3-ketoacyl-acyl carrier protein synthase I [Arabidopsis thaliana] | 1400 | 3e-152 |
| AAF61730 beta-ketoacyl-ACP synthetase I [Glycine max] | 1379 | 7e-150 |
| AAF61731 beta-ketoacyl-ACP synthetase I-2 [Glycine max] | 1374 | 3e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P52410 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic | 1412 | 4e-155 |
| P23902 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic | 1308 | 5e-143 |
| Q83E37 3-oxoacyl-[acyl-carrier-protein] synthase 2 | 686 | 7e-071 |
| P73283 3-oxoacyl-[acyl-carrier-protein] synthase 2 | 683 | 1e-070 |
| Q9KQH9 3-oxoacyl-[acyl-carrier-protein] synthase 2 | 660 | 7e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M508 Beta-ketoacyl-ACP synthetase I | 1379 | 5e-150 |
| Q9M507 Beta-ketoacyl-ACP synthetase I-2 | 1374 | 2e-149 |
| B9H3Z7 Predicted protein | 1372 | 3e-149 |
| Q07DQ7 Plastid 3-ketoacyl-ACP synthase I | 1370 | 5e-149 |
| A1Z3W6 Plastid 3-keto-acyl-ACP synthase I | 1369 | 7e-149 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46290.1 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase/ transferase, transferring acyl groups other than amino-acyl groups | 1413 | 3e-156 |
| AT5G46290.2 KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase | 1108 | 7e-121 |
| AT1G74960.2 FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase | 959 | 1e-103 |
| AT1G74960.1 FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase | 959 | 1e-103 |
| AT2G04540.1 3-oxoacyl-(acyl-carrier-protein) synthase II, putative | 577 | 2e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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