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Information for unigene UN05378

FASTA Sequence
Unigene ID: UN05378Length: 1451 SSR 
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCTCTTGGCATTGCTCAACCACTCGATGGATTCCACCTACCACTCT
TCTTCTTCCCCCTTTTAAACCCTAACAGTTTCTCTCCACATCACCCTCGGTTCCATCATGGCCTTGTTCTTCTCCACTGCTACCTC
TTCTCTTCTCTTCCTCACCTTCTCCCTCGCCCTCTACTGCAGCCTCGACCCCTTCAACCACTGCGCCATCTCGGACTTCCCAAACT
TCGTAGCTCACGAGGTTGTCTCTCCACGCCCCGATCAAGTGCCATGGGAGAGAGACTCACAGAACTCGCTTCAGAGATCCGAGATT
CTGTTTCAGAACCAAGTCCAGGGCCCTGAGAGCGTCGCCTTTGATCCTCTAGGACGCGGTCCATACACCGGCGTTGCTGATGGTAG
GGTTTTGTTCTGGAATGGTCACAACTGGACTGACTTCGCATACACGTCAAGCAATAGATCGGAGATTTGTGATCTGAAGCCTTCTG
CTATGAGTTACTTGAGGAACGAGCATATATGTGGGCGTCCTCTGGGACTCCGTTTCGATAAGAGAACCGGTGATTTGTACATAGCC
GACGCATATATGGGACTGTTGAAAGTAGGTCCTGAAGGTGGCTTAGCAATGCCGCTTGTAACCGAAGCTGAAGGCGTCCCGTTGGG
GTTTACTAACGACCTTGACATTGATGATGATGGAACTGTTTACTTTACTGATAGCAGCATCAATTACCAGAGAAGGAACTTTTTGC
AGCTCGTTTTCTCTGGAGACAATACCGGGAGGGTTCTTAAGTATGATCCAATAGCAAAGAAAGCTGTTGTTCTAGTCTCAAATGTT
CAGTTTCCGAACGGTGTGTCTATCAGCAAAGACGGTTCTTTCTTTGTTTTCTGCGAGGGTGATATTGGAAGCCTGCGAAGATACTG
GTTAGAAGGAGAGAAAGCTGGAACGACAGATGTGTTTGCAATGTTACCAGGGCATCCTGATAACGTAAGGACAAACAAAGAAGGTG
AATTTTGGGTGGCGCTTCACTGCAGGCGCAACTACTACTCGTACATAATGGCAAGATACCCTAAGCTAAGGATGTTCATACTGAGA
CTCCCAATCACCGCAAGAATACACTACATGTTCCAGATCGGGATGCGGCCGCACGGATTGGTGGTGAAGTATAGCCCCGAAGGGAG
GCTTGTGAAGGTACTGGAAGATAGTGAAGGGAAAGTTGTGAGATCAGTGAGTGAAGTGGAAGAAAAAGATGGGAAGCTTTGGTTGG
GGAGTGTGTTGATGAATTTTGTTGCTGTCTTTGATCTTTGATTTTATTAAAACTTACACGTAAAAACAGCGTAGAAAGGCAAGTAG
AATGCAGTTTTCATTTATCCTTCTATCAGTTAGCTACTAGTTGCCCACCCATTATCGAGTACCACGAGTTGCCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874041 strictosidine synthase family protein [Arabidopsis lyrata subsp. lyrata]19352e-214
NP_680189 strictosidine synthase family protein [Arabidopsis thaliana]19055e-211
BAD95409 putative strictosidine synthase - like [Arabidopsis thaliana]18983e-210
XP_002513740 strictosidine synthase, putative [Ricinus communis]15023e-164
XP_002298158 predicted protein [Populus trichocarpa]15005e-164

Swiss-Prot top hits (Blast detail)Scoree value
Q7TP48 Adipocyte plasma membrane-associated protein4761e-046
Q9HDC9 Adipocyte plasma membrane-associated protein4714e-046
Q9D7N9 Adipocyte plasma membrane-associated protein4697e-046
Q3T0E5 Adipocyte plasma membrane-associated protein4662e-045
B5X3B2 Adipocyte plasma membrane-associated protein4625e-045

TrEMBL top hits (Blast detail)Scoree value
Q9C586 At5g2202019054e-211
Q56XH7 Putative strictosidine synthase-like (Fragment)18982e-210
B9RJ21 Strictosidine synthase, putative15022e-164
B9GEP6 Predicted protein15003e-164
Q8VWF6 At1g08470/T27G7_914198e-155

Arabidopsis top hits (Blast detail)Scoree value
AT5G22020.1 strictosidine synthase family protein19062e-213
AT1G08470.1 strictosidine synthase family protein14194e-157
AT3G57030.1 strictosidine synthase family protein9222e-099
AT3G59530.1 strictosidine synthase family protein7851e-083
AT3G59530.2 strictosidine synthase family protein7851e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  17%
 
128  67%
 
182  17%

Unigene MembersMember information