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Information for unigene UN05378
| FASTA Sequence |
| Unigene ID: UN05378 | Length: 1451 |
SSR | | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCTCTTGGCATTGCTCAACCACTCGATGGATTCCACCTACCACTCT
TCTTCTTCCCCCTTTTAAACCCTAACAGTTTCTCTCCACATCACCCTCGGTTCCATCATGGCCTTGTTCTTCTCCACTGCTACCTC
TTCTCTTCTCTTCCTCACCTTCTCCCTCGCCCTCTACTGCAGCCTCGACCCCTTCAACCACTGCGCCATCTCGGACTTCCCAAACT
TCGTAGCTCACGAGGTTGTCTCTCCACGCCCCGATCAAGTGCCATGGGAGAGAGACTCACAGAACTCGCTTCAGAGATCCGAGATT
CTGTTTCAGAACCAAGTCCAGGGCCCTGAGAGCGTCGCCTTTGATCCTCTAGGACGCGGTCCATACACCGGCGTTGCTGATGGTAG
GGTTTTGTTCTGGAATGGTCACAACTGGACTGACTTCGCATACACGTCAAGCAATAGATCGGAGATTTGTGATCTGAAGCCTTCTG
CTATGAGTTACTTGAGGAACGAGCATATATGTGGGCGTCCTCTGGGACTCCGTTTCGATAAGAGAACCGGTGATTTGTACATAGCC
GACGCATATATGGGACTGTTGAAAGTAGGTCCTGAAGGTGGCTTAGCAATGCCGCTTGTAACCGAAGCTGAAGGCGTCCCGTTGGG
GTTTACTAACGACCTTGACATTGATGATGATGGAACTGTTTACTTTACTGATAGCAGCATCAATTACCAGAGAAGGAACTTTTTGC
AGCTCGTTTTCTCTGGAGACAATACCGGGAGGGTTCTTAAGTATGATCCAATAGCAAAGAAAGCTGTTGTTCTAGTCTCAAATGTT
CAGTTTCCGAACGGTGTGTCTATCAGCAAAGACGGTTCTTTCTTTGTTTTCTGCGAGGGTGATATTGGAAGCCTGCGAAGATACTG
GTTAGAAGGAGAGAAAGCTGGAACGACAGATGTGTTTGCAATGTTACCAGGGCATCCTGATAACGTAAGGACAAACAAAGAAGGTG
AATTTTGGGTGGCGCTTCACTGCAGGCGCAACTACTACTCGTACATAATGGCAAGATACCCTAAGCTAAGGATGTTCATACTGAGA
CTCCCAATCACCGCAAGAATACACTACATGTTCCAGATCGGGATGCGGCCGCACGGATTGGTGGTGAAGTATAGCCCCGAAGGGAG
GCTTGTGAAGGTACTGGAAGATAGTGAAGGGAAAGTTGTGAGATCAGTGAGTGAAGTGGAAGAAAAAGATGGGAAGCTTTGGTTGG
GGAGTGTGTTGATGAATTTTGTTGCTGTCTTTGATCTTTGATTTTATTAAAACTTACACGTAAAAACAGCGTAGAAAGGCAAGTAG
AATGCAGTTTTCATTTATCCTTCTATCAGTTAGCTACTAGTTGCCCACCCATTATCGAGTACCACGAGTTGCCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874041 strictosidine synthase family protein [Arabidopsis lyrata subsp. lyrata] | 1935 | 2e-214 |
| NP_680189 strictosidine synthase family protein [Arabidopsis thaliana] | 1905 | 5e-211 |
| BAD95409 putative strictosidine synthase - like [Arabidopsis thaliana] | 1898 | 3e-210 |
| XP_002513740 strictosidine synthase, putative [Ricinus communis] | 1502 | 3e-164 |
| XP_002298158 predicted protein [Populus trichocarpa] | 1500 | 5e-164 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q7TP48 Adipocyte plasma membrane-associated protein | 476 | 1e-046 |
| Q9HDC9 Adipocyte plasma membrane-associated protein | 471 | 4e-046 |
| Q9D7N9 Adipocyte plasma membrane-associated protein | 469 | 7e-046 |
| Q3T0E5 Adipocyte plasma membrane-associated protein | 466 | 2e-045 |
| B5X3B2 Adipocyte plasma membrane-associated protein | 462 | 5e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C586 At5g22020 | 1905 | 4e-211 |
| Q56XH7 Putative strictosidine synthase-like (Fragment) | 1898 | 2e-210 |
| B9RJ21 Strictosidine synthase, putative | 1502 | 2e-164 |
| B9GEP6 Predicted protein | 1500 | 3e-164 |
| Q8VWF6 At1g08470/T27G7_9 | 1419 | 8e-155 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G22020.1 strictosidine synthase family protein | 1906 | 2e-213 |
| AT1G08470.1 strictosidine synthase family protein | 1419 | 4e-157 |
| AT3G57030.1 strictosidine synthase family protein | 922 | 2e-099 |
| AT3G59530.1 strictosidine synthase family protein | 785 | 1e-083 |
| AT3G59530.2 strictosidine synthase family protein | 785 | 1e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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