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Information for unigene UN05388
| FASTA Sequence |
| Unigene ID: UN05388 | Length: 1444 |
SSR | | GGATTACTAACCATTTTGCTAATCAATCACTCTTCACTTCTCCCCAGTCCTACTTTTTTCCATTATAAGCAATTTCTCCATCTCTC
TCATACTATCTGCACAACACTACTAAAAAGAGCTAAATTGGGATATTGTAAAAGAAGATGTTTGGACAAAGCTTCCCAGAGGATCT
TGATTGTGGCAACTTCTTTGACAACATGGACGATATTCTTGATTTTCCCGGTGGCGATATTGATGTCGGTTTCGGCATCGGTGACT
CCGACTCTTTCCCTAACATCTGGACCTCTCATAACGACACATGGCCTGCAGCTTCCAATCCTCTCTTCTCTTCCAACACAAACTCT
GACACATCGCCTGAGCTCTATGTTCCGTTCGAAGATATTGTTAAAGTGGAAAGGCCACAAAGCGTTGTAGAGGAATCCTTAGTTGA
GAAGAAGGAAGATTCGTTTCCCACAAACACGGATTCATCGTCTTCTCACAGTCATTTCAGGAGCTCTAGTCCAGTGTCGGTCCTCG
AAAGTAGTTCCTCATCGTCTCATACGACCAACACAACCTCACTTGTCCTCCCTGGAAAGCCCGGGCGTCCACGCACAAAACGTCCT
CGTCCACAGGTCCAGGAGAAAGATAGAGTCAACGAAAATGCTTTTGGGGCGGACTCGCGCCTCATCATTAGAATACCAACGCAGTT
TCTCTCCGACCACAGCAAGATGATAACCAAGAAGAAGAAGAAGAAAGCCAAGGTCGTTGTTTCTTCATCTTCTTGGTCAGGGATTG
ATCTTGAAACCAATGGAAACAAAAATGTAGATTCGTGTTCTTCAGAGCAGAATCCTGTTAGGAAATGCATGCATTGTGAAGTCACC
AAGACCCCACAGTGGAGACTCGGGCCTATGGGCCCAAAGACGCTTTGCAATGCTTGCGGTGTACGTTACAAATCTGGAAGGCTTTT
CCCGGAGTACCGGCCAGCTTCTAGCCCGACGTTTACTCCAGCTCTTCACTCAAACTCCCACAAGAAGGTGGCTGAAATGAGAAACA
AGAGATGCAGCAATGTAAGCTACACAAATGAAGAGAATGATCTGCAAGATCTGGTTCTGAGCAATGCCTACATTGGCATAGGAGTA
GGAAAGAGTCAGAGAGTAGGAAAGTTTTAGCTTTAGAAGAGATGGATGAAGAGGAGCAATCAATTGAGGAAGGGATCAAAAGTTTG
ATGAGAGTTGATTGTGTTGTATTTTGTATTATATGTAGTGTGAATGGGCAAAACTCTTGAAACAAAGGAAGAGTAAGTTGGGGAAG
AGCAGAAGATGTTGAAGAAACTAGTGAGAGTTAGGTGTTGAATTTTACATTAAATCTTCCTCTCCTTTTCCTTCCTTTCAATTCTT
TGTATTTTTATTGTGAGGATTCTTTTTGTAGTTGATTTGTTTAGCTAAACTATTATCCTTTTTTTCGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191041 GATA transcription factor 8 [Arabidopsis thaliana] | 1458 | 4e-159 |
| BAH20385 AT3G54810 [Arabidopsis thaliana] | 1454 | 1e-158 |
| XP_002876270 BME3/BME3-ZF [Arabidopsis lyrata subsp. lyrata] | 1432 | 4e-156 |
| BAJ34547 unnamed protein product [Thellungiella halophila] | 1406 | 4e-153 |
| XP_002273502 PREDICTED: hypothetical protein [Vitis vinifera] | 648 | 3e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SV30 GATA transcription factor 8 | 1458 | 2e-160 |
| Q6DBP8 GATA transcription factor 11 | 325 | 4e-029 |
| O82632 GATA transcription factor 9 | 307 | 4e-027 |
| Q8VZP4 GATA transcription factor 10 | 306 | 6e-027 |
| P69781 GATA transcription factor 12 | 306 | 6e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHF1 AT3G54810 protein | 1458 | 2e-159 |
| B9DI18 AT3G54810 protein | 1454 | 7e-159 |
| B9T724 GATA transcription factor, putative | 596 | 2e-059 |
| Q76DX9 AG-motif binding protein-5 | 582 | 9e-058 |
| C6EW00 AG-motif binding protein | 581 | 1e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G54810.2 zinc finger (GATA type) family protein | 1458 | 1e-161 |
| AT3G54810.1 zinc finger (GATA type) family protein | 1458 | 1e-161 |
| AT1G08010.1 zinc finger (GATA type) family protein | 325 | 3e-030 |
| AT1G08010.2 zinc finger (GATA type) family protein | 325 | 3e-030 |
| AT4G32890.1 zinc finger (GATA type) family protein | 307 | 4e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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