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Information for unigene UN05397

FASTA Sequence
Unigene ID: UN05397Length: 1223 SSR 
TTTTTTTTACTTGCGATTTTGTTCGGAGGAAGAAGGAAAGAGAGGAGGAGGAGGAGATGGGAGAACGAAAGGTGCTTAACAAGTAC
TACCCTCCGGACTTCGATCCGTCGAAGCTTCCACGGCTCAGGCGACCGAAGAACCAGCAGATCAAGGTGCGTATGATGCTTCCCAT
GAGCGTCCGGTGCAGTACCTGCGGAAACTATATCTACAGGGGAACCAAGTTCAATTCCCGTAAAGAAGACGTCATTGGCGAGACAT
ATCTGGGGATTCAAATCTTTAGATTCTACTTCAAGTGCACCAAGTGTTCTGCGGAGCTGACTATGAAGACGGATCCACAGAACTCT
GATTATATTGTGGAATCTGGGGCAAGTCGTAATTACGAACCTTGGCGTGCTGAAGACGAGGAGGTTGATAAGGAACAGCAGAAAAG
AGATGCCGAGGAGATGGGGGACGCTATGAAGTCTTTGGAGAACCGAACTTTGGATTCCAAAAGGGAAATGGACATTATTGCCGCTC
TTGATGAAATGAAATCAATGAAGTCTAGACACGCTACTGTGAGCGTAGATGCGATGCTGGAGGCCTTGCAAAGAACTGGCGCTGAG
AAGGTCAAACGAATAGAAGAAGAAGATGAAGCAGTTATTAAGTCGAGATTTGGTAAACAGAAAGAAGTTGTTAGGAGAATTGTAGA
TGAAGACGATGAAGATGATGATGATGATGATGATGATGATGATGATGATGATGATCCCAGCGTTCAGAAGGAGAAGAAAGAAGGAT
CATCTTCAGATGTTTCAAAGAAGAGAAAGGCATCAGAAGAAAGTCCAAGCAACCCCACCGATATTTTGACTAATTCATTTGCAGAT
AACCCTAAGCAGCCCAAGAAGCGAGCTACCAGCAAGTAACCCTTCAAATCCATTCACATAACAGTCATCAAGAAGCAATTTCAACC
AACAACTTTTTTTACGACTCCAGCTCCTGCAAAACCAGAGGAGAAGAAGAGTGACGTTGTGGCTAACGCCGGGTTGGCATCTTTGT
TCCAGAACTATGGCAGTGATGAAGACGAGGATTGATTTGTTTTTTTGGGCTCACATCAGGTTTCGCACTCTTTATAGTGTTTTTAT
ATCAGTGTTTCAGAATTGAAGACATCCATGTACTGTTCATAACATGAGATTTTTTTTCAGAAAACTTTGACTGGATATTACAATGC
ATATTTGGAGAAGTTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173156 uncharacterized protein [Arabidopsis thaliana]14602e-159
NP_001077550 uncharacterized protein [Arabidopsis thaliana]14422e-157
XP_002890205 hypothetical protein ARALYDRAFT_471912 [Arabidopsis lyrata subsp. lyrata]14305e-156
XP_002518796 Coiled-coil domain-containing protein, putative [Ricinus communis]10685e-114
XP_002263474 PREDICTED: hypothetical protein [Vitis vinifera]10676e-114

Swiss-Prot top hits (Blast detail)Scoree value
Q54WR5 Coiled-coil domain-containing protein 94 homolog6004e-061
Q9BW85 Coiled-coil domain-containing protein 945825e-059
Q9D6J3 Coiled-coil domain-containing protein 945735e-058
Q9P7C5 Cell cycle control protein cwf164642e-045
Q9D516 Coiled-coil domain-containing protein 1302124e-016

TrEMBL top hits (Blast detail)Scoree value
Q9SHH1 At1g1713014601e-159
A8MR03 Uncharacterized protein At1g17130.214421e-157
B9RY29 Coiled-coil domain-containing protein, putative10683e-114
A9PGF9 Putative uncharacterized protein10219e-109
B9I1C9 Predicted protein10065e-107

Arabidopsis top hits (Blast detail)Scoree value
AT1G17130.1 cell cycle control protein-related14893e-165
AT1G17130.2 cell cycle control protein-related14713e-163
AT2G32050.1 cell cycle control protein-related6523e-068
AT3G43250.1 cell cycle control protein-related4444e-044
AT2G29430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: cell cycle control protein-related (TAIR:AT1G17130.1).2374e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information