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Information for unigene UN05461

FASTA Sequence
Unigene ID: UN05461Length: 921 SSR 
GAATCGAAATGCAAAAGTAAAAATGGGAAGAAGAAAGCAGTAGCGTAAATCTTCGATAACAAGCTATATATGTAATAAAGTAGTTT
CTGTGTTCTACGTACAAGAGGGTCTCCCCTCCTTACTCAAGTTATAACAACGATCACAAAATCAATTCACATACCCGAAAAAAAAA
AGAAAAACAATATAAGAAAACCGAAAAAAAAAACTCAGATAATGTTTTGCCCCTCCATCCAGATTTGCCCAGCAAAATCAACTCAA
CCACAAACTTTCTCTCTACGCCTTGCCGGCAATGTTGTTGGACGGCCAGTCAAGACCTTCGTAAAGCCCCTCGCCTGAAGTGGCAC
ATGTGCTCTGGATGTACCAGTGACGCTGACGGAGAGAGTGAAGACCAAGCTTATCAGTGATTTCAGCTGCGTTCATAGCATTTGGA
AGATCCTGCTTGTTAGCAAACACGAGCAAAACAGCATCACGCAGCTCATCCTCATTGAGCATTCTGTGCAATTCATCTCTAGCCTC
AACAACACGGTCTCTGTCATTGCTGTCCACCACAAAGATGAGACCTTGAGTGTTCTGGAAGTAGTGCCTCCACAATGGACGAATCT
TGTCTTGACCCCCGACATCCCAGACAGTGCAGCTGATGTTCTTGTACTCAACAGTCTCAACATTGAACCCAATAGTGGGGATGGTG
GTGACGATCTCACCGAGCTTGAGCTTGTACAAAATGGTGGTCTTACCAGCAGCATCAAGACCAACCATGAGGATCCTCATCTCCTT
CTTTGCAAAAAGCCTGCTGAAAAGCTTGGCGAACGACAATCCCATCCTTGCTTCACTCTATGTAGATGATCTGATCGATTGAGAGA
GAGAGATGGCGTAACAACAAGACGGAGTTTGAACGCGAGAGAGAAGAAAGCTTGAAAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177206 ADP-ribosylation factor 2 [Arabidopsis thaliana]9232e-097
AAC98042 Strong similarity to gb|M95166 ADP-ribosylation factor from Arabidopsis thaliana. ESTs gb|Z25826, gb|R90191, gb|N65697, gb|AA713150, gb|T46332, gb|AA040967, gb|AA712956, gb|T46403, gb|T46050, gb|AI100391 and gb|Z25043 come from this gene9196e-097
ACD37536 putative ADP-ribosylation factor [Brassica napus]9196e-097
XP_002888782 hypothetical protein ARALYDRAFT_476172 [Arabidopsis lyrata subsp. lyrata]9196e-097
NP_172533 ADP-ribosylation factor A1F [Arabidopsis thaliana]9171e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRC3 ADP-ribosylation factor 29239e-099
P36397 ADP-ribosylation factor 19131e-097
O48920 ADP-ribosylation factor9094e-097
Q06396 ADP-ribosylation factor 19068e-097
P51823 ADP-ribosylation factor 29068e-097

TrEMBL top hits (Blast detail)Scoree value
B2Z3W8 Putative ADP-ribosylation factor9194e-097
Q6ID97 At1g106309177e-097
B0LT37 ADP-ribosylation factor9142e-096
A9P9U3 Predicted protein9132e-096
A9P9X4 Predicted protein9132e-096

Arabidopsis top hits (Blast detail)Scoree value
AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding9246e-100
AT1G23490.1 ATARF1 (ADP-RIBOSYLATION FACTOR 1); GTP binding / phospholipase activator/ protein binding9246e-100
AT1G70490.3 ARFA1D; GTP binding / phospholipase activator/ protein binding9246e-100
AT1G70490.2 ARFA1D; GTP binding / phospholipase activator/ protein binding9246e-100
AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding9183e-099

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  50%
 
112  50%

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