Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05485

FASTA Sequence
Unigene ID: UN05485Length: 1165 SSR 
GGTATCCAACACGTGCTTTCGACATGGCTCACTGCTCTCGTTGTTTGATTCCGTGGGGAGCGAATGATGGGATGTACTTGATGGAA
GTTGACCGTGTACTTAGACCCGGCGGGTACTGGATCCTATCCGGTCCTCCAATCAACTGGAAGATCAACTACAAGGCATGACAACG
TCCCAGGGAGGATCTTGAAGAGGAACAAAGAAAGATCGAGGAAGCTGCCAAGCTTCTCTGCTGGGAGAAGAAGTACGAACACGGCG
AGATCGCCATCTGGCAGAAGAGAGTCAACGACGAGGCGTGCCGCTCGAGACGAGACGACCCGAGAGCCAACTTCTGCAAAACCACT
GATGACACCGATGACGTGTGGTACAAGAAAATGGAGGCGTGCATTACACCTTACCCCGAAACAAGTAGCTCTGATGAAGTGGCTGG
AGGTGAGCTTCAGGTTTTCCCTGATAGGCTCAACGCGGTGCCGCCTAGGATCTCTAGCGGCTCGGTCTCTGGCGTCACGGCTGATG
CGTATGAGGATGATAACAGACAGTGGAAGAAACATGTGAAGGCTTACAAGAGGATCAATAGTTTGATTGATACTGGGAGGTACCGT
AACATCATGGACATGAACGCAGGGTTTGGTGGGTTTGCTGCTGCTTTGGAATCGCAGAAGCTTTGGGTTATGAATGTTGTTCCAAC
CATGGCGATCATGTCAGGCAACAAAACAAGAAGCTCCGTCCAGATCTTCATCGTCTTCAGCCTCTGCTGCTTCTTCTACATCCTCG
GAGCGTGGCAACGAAGCGGCTTCGGCAAAGGAGACAGCATCGCTCTCGAGATGACCAACAGCGCCACGGCATCAGACTGCAACATC
GTCCCGAGCCTAAACTTCGAAACCCACCACGTCTCCTCCTCCTCCTCCTCGTCAAAGGCCAAAACCTTCGAGCCCTGCGCCGCACG
CTACACAGACTACACCCCCTGCCACGACCAGAAACGCGCAATGACGTTCCCTAGAGAGAGCATGATCTACCGCGAGAGGCACTGCT
TTCCGGAGGACCAGAAGCTACGCTGCCTAGTCCCGGCTCCTAAAGGATACGTGACGCCTTTCTCTTGGCCTAAGAGTAGAGACTAC
GTCCCTTACGCGAACGCGCCGTACAGGCCTTGACTGTTGAGAAGCGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_849711 putative methyltransferase PMT2 [Arabidopsis thaliana]12092e-130
AAD14491 Unknown protein [Arabidopsis thaliana]12092e-130
NP_564265 putative methyltransferase PMT2 [Arabidopsis thaliana]12092e-130
BAH19504 AT1G26850 [Arabidopsis thaliana]12092e-130
XP_002893375 dehydration-responsive family protein [Arabidopsis lyrata subsp. lyrata]12056e-130

Swiss-Prot top hits (Blast detail)Scoree value
B9DFI7 Probable methyltransferase PMT212099e-132
Q94EJ6 Probable methyltransferase PMT147877e-083
Q9C884 Probable methyltransferase PMT187052e-073
Q9SZX8 Probable methyltransferase PMT177009e-073
O80844 Probable methyltransferase PMT166936e-072

TrEMBL top hits (Blast detail)Scoree value
B9HJT1 Predicted protein10182e-108
B9HVA8 Predicted protein10163e-108
B9S8V6 ATP binding protein, putative10048e-107
Q9M609 Putative uncharacterized protein9591e-101
A5AG45 Putative uncharacterized protein9322e-098

Arabidopsis top hits (Blast detail)Scoree value
AT1G26850.1 dehydration-responsive family protein12098e-133
AT1G26850.3 dehydration-responsive family protein12098e-133
AT1G26850.2 dehydration-responsive family protein12098e-133
AT4G18030.1 dehydration-responsive family protein7876e-084
AT1G33170.1 dehydration-responsive family protein7052e-074

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information