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Information for unigene UN05487

FASTA Sequence
Unigene ID: UN05487Length: 1219 SSR 
GGAATCGTCCGTCCATCGTTCTTCTTCTTCGCTCTGCGCCGCGTTCTCTCTCTCTCTCTCTCTCTCTCTCTAGAACTCTCAGCTCA
GAAACCCTAATGGATGTTAGGCGGCGTGAAAGTAGGACGGAAGCAAGTAACAGAGAGAAACGGATTAACGAGAAGGATCAGATGAA
TCAAGAGTCTTTCATTGAGGAGCTTGCAGAAGAGTTTAGATTGCCAATAACACACGGGGTGACTGAGAATGTTGATCTTGAGGATG
TGGAGCAAGCGTCACTAGACACAATGATATCATCTTCAAACGTTGGGTTTCGTCTTCTTCAGAAGATGGGTTGGAAAGGGAAAGGT
CTTGGCAAGCAAGAGCAAGGGATAACGGAGCCTATAAAGTCCGGTATAAGGGACCGAAGGCTCGGTTTAGGGAAGCAAGAAGAGGA
TGATTATTTCACTGCAGAGGAAAACATCCAAAGGAGGAAGCTTGATATTGAGATCGAGGAGACTGAGGAGATCGCTAAGAAACGGG
AGGTCCAAGCAGAACGTGAGCTGAAGATTGAGAGCGATGTCAAAGAAATACGCAAAACCTTCTACTGTGAACTCTGCAGCAAGCAG
TATAGAACGGTGATGGAGTTTGAAGGTCACTTGAGCTCGTATGATCACAACCATAAGAAGAGATTCAAAGAGATGAAAGAAATGCA
TGGTGCAAGCAGCCGGGATGATAGGAAGAAGCGAGAGCAGCAGCGTCAAGAGAGGGAGCTGACTAAAATGGCTGATGCTCGTAAAC
AGCAGCAGATGCAACAGCAGAACATGCAAGAAGACCCAGAGAATGCCCCAGTTCCATTGCCTGCAAAGACCACTCTTGTACCACTT
GTTGTCCAAGATCAGCGGAAGTCTTTGAAGTTTGGCTTTTCTTCAAAAAGCGGCAGTACATCAAAGAACCAACCCAAGAGCAGCAT
CAAGAAGCCTAAAATAGCGATTGCATCTGTTTTTGGCAACGATAGCGACGAAGACTAAGGTTTACATGCATCATCGAGAATATTGT
ACTAAATGTAATTCTATTTTATGGTTCTTCGTTTCACACTGAACATGGTCTGAAAAATCTTCACATCTCAGGACCACAACATAGCC
TTGCAACTTTTTGTGTTTATTAAAGGAAATCTTAAAAGACACTTGGGGCTAGACTAATGCGTTTTAGTCCAATGAATGAATGTATT
CAGTTCTTATTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872231 D111/G-patch domain-containing protein [Arabidopsis lyrata subsp. lyrata]13696e-149
NP_850884 D111/G-patch domain-containing protein [Arabidopsis thaliana]13517e-147
AAM61019 unknown [Arabidopsis thaliana]13517e-147
AAC13593 contains similarity to Arabidopsis thaliana DNA-damage-repair/tolerance resistance protein DRT111 (SW:P42698)10344e-110
XP_002512582 nucleic acid binding protein, putative [Ricinus communis]10238e-109

Swiss-Prot top hits (Blast detail)Scoree value
Q9UKJ3 G patch domain-containing protein 83782e-035
A2A6A1 G patch domain-containing protein 83782e-035
Q7Z570 Zinc finger protein 804A1882e-013
A2AKY4 Zinc finger protein 804A1882e-013
A4D1E1 Zinc finger protein 804B1722e-011

TrEMBL top hits (Blast detail)Scoree value
Q147M4 At5g2661013571e-147
Q8LG59 Putative uncharacterized protein13571e-147
O65245 F21E10.7 protein10406e-111
B9RFR3 Nucleic acid binding protein, putative10235e-109
B9I6C5 Predicted protein9545e-101

Arabidopsis top hits (Blast detail)Scoree value
AT5G26610.1 D111/G-patch domain-containing protein13584e-150
AT5G26610.2 D111/G-patch domain-containing protein13584e-150
AT3G57910.1 D111/G-patch domain-containing protein1381e-008
AT3G54230.1 nucleic acid binding / nucleotide binding / zinc ion binding1353e-008
AT2G42330.1 D111/G-patch domain-containing protein1335e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  50%
 
121  17%
 
102  33%

Unigene MembersMember information