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Information for unigene UN05509
| FASTA Sequence |
| Unigene ID: UN05509 | Length: 1335 |
SSR | | AATCAAAACTCCAAAAGTTCGTTTTCTTTCTCTGACTAGAAACTTCCCAGCGATGTCAGGTTACCCTCCGACGAGCCAAGGCTACG
GTTACAGCTACGGCGCTGGAAACAATCCTCCGACGAGCCAAGGTTACGGCTACGGCGGCGGCGGAAACAATCCTCCGCACGGATCA
TCATCATCATCTCCTTACGCTGTTCCCTACGGCGGCGCATCGAAGCCCCAATCTTCTTCCTACGGCGCACCGCCTCCTTCCGCACC
ACCGTACGCGCCTCCTTCTCCGGGGGACTTCAACCCGCCAAAGGAGAAGCCTGTCGGAGGCTACGGACCTCCGCCGCCGTCCGCGC
CTTCTTCGGATTACGGCGGTTACGGCGGTGCTCCTCCCCGTCCGTCGCAGGGAGGTTACGGAGCTACTCCGCCGCAAGGGGTTTCC
GGTTACGGTGCCCCGCCGCGTCCGTACGGTGGATACGGAGCTGCTCCGCCGCCGTCGGTGATTCCTGAGTACGGTGGTTACGGTGC
TCCGCCTCGTCCGGCGACGTCGTCAGGACACGGCGGATACGGAGGCTATCCTCCTCAGGGATCGTACGGAAGTCCGTTCGCTTCTC
TGATCCCGTCAGGTTTTGCTCCGGGGACGGATCCGAACATAGTGGCTTGCTTCCAGGCGGCTGATCAGGACGGCAGTGGGTTCATC
GATGACAAGGAGCTTCAGGGTGCTCTCTCTTCTTATCAGCAGAGATTCAGCATGAGAACTGTTCATCTTCTTATGTATCTATTCAC
CAACACCAATGCCATGAAAATAGGACCTAAGGAGTTTACTGCACTTTTCTACAGTCTTCAGAACTGGAGGTCCATCTTTGAGAGGT
CTGATAAGGACAGGAGCGGGAGAATAGATGTGAGTGAGCTGAGAGATGCGCTTCTGAGCCTCGGGTTTTCAGTTTCTCCTGTGGTT
TTGGATCTTCTTGTTTCCAAATTCGACAAAAGCGGTGGCAAGAACAGAGCCATCGAATATGACAATTTCATCGAGTGCTGCCTCAC
TGTTAAGGGACTAACAGAGAAGTTCAAGGAGAAGGACACAGGATACTCAGGCTCAGCTACTTTCACTTACGAATCCTTCATGCTCA
CTGTCCTCCCCTTCCTCATCGCTTAAAGTTTCTTGTAACGGATGAAACCCACCCCTTTGCGCATTTTTCACATCTTCTTATGTTGT
TGTTGTCGTTGTATGATCGTCTCTGGTGTGAATGCTGTTTGTTACAAGTTACTTTTCCGGTTTGGTTGGATTCCAGAGTTCAAAAC
AAAGTGTAAAAACAAACTTGTGGTATAAAAGAATCAATCAACTCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871078 hypothetical protein ARALYDRAFT_908301 [Arabidopsis lyrata subsp. lyrata] | 1399 | 2e-152 |
| NP_196037 putative calcium-binding protein CML50 [Arabidopsis thaliana] | 1345 | 4e-146 |
| BAJ99268 predicted protein [Hordeum vulgare subsp. vulgare] | 1059 | 6e-113 |
| BAJ91018 predicted protein [Hordeum vulgare subsp. vulgare] | 1059 | 6e-113 |
| BAK01754 predicted protein [Hordeum vulgare subsp. vulgare] | 1037 | 2e-110 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FYE4 Probable calcium-binding protein CML50 | 1395 | 3e-153 |
| Q8W4L0 Probable calcium-binding protein CML49 | 1031 | 5e-111 |
| Q9ZQH1 Probable calcium-binding protein CML48 | 395 | 3e-037 |
| Q8BFY6 Peflin | 390 | 1e-036 |
| Q641Z8 Peflin | 387 | 2e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2RAR8 EF hand family protein, expressed | 1002 | 2e-106 |
| A2ZHW9 Putative uncharacterized protein | 997 | 6e-106 |
| Q2QY10 EF hand family protein, expressed | 997 | 6e-106 |
| C5Y461 Putative uncharacterized protein Sb05g002410 | 980 | 6e-104 |
| B6SNX9 Grancalcin | 974 | 3e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G04170.1 calcium-binding EF hand family protein | 1396 | 2e-154 |
| AT3G10300.3 calcium-binding EF hand family protein | 1032 | 3e-112 |
| AT3G10300.2 calcium-binding EF hand family protein | 851 | 3e-091 |
| AT3G10300.4 calcium-binding EF hand family protein | 851 | 3e-091 |
| AT3G10300.1 calcium-binding EF hand family protein | 505 | 4e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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