Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05560

FASTA Sequence
Unigene ID: UN05560Length: 1206 SSR 
GGAAACTCAAACATCATCATCTGAGATTGATTGATTGAAAGAGAGAGAGAGAGAGAGAAATGGAGAACAATACTAAGAGCGGAGGA
TCGGCGATGGAAGCGTTCGAGAAGCCAGAGAAAGTAGGAGAAGGGACATACGGGAAAGTGTACAGAGCAAGAGAGAAGGCAACTGG
TCTCATCGTCGCTTTGAAGAAGACTCGTCTCCATGAGGACGAAGAAGGCGTTCCTCCCACCACTCTCCGCGAGATCTCCATCCTCC
GCATGCTCGCTCGCGATCCCCACATCGTCAGGTTGATGGATGTTAAGCAAGGATTGAACAAAGAAGGCAAGACTGTGCTCTACCTT
GTCTTCGAGTACGTTGACACTGATCTCAAGAAGTTCATCAGGAGCTTCAAGCACGCTGGCCAAAACATTCCCCAGAACACTGTCAA
GTGTTTGATGTACCAACTATGCAAAGGCATGGCTTTCTGCCATGGCCATGGAGTGTTGCACAGGGATCTTAAGCCTCACAATCTCT
TGATGGACCGTCAGAAAATGACCCTCAAAATAGCTGATCTTGGATTAGCCAGAGCCTTCACTCTCCCTATGAAAAAGTATACATGA
GATACTAACTCTATGGTATAGAGCTCCAGAAGTCCTTCTCGGTGCAACCCATTACTCAACCGCTGTTGATATGTGGTCTGTTGGCT
GCATTTTTGCTGAACTTGTGAACAAGCAAGCAATCTTTGCTGGAGACTCTGAGCTCCAACAGCTCCTCAGTATTTTCAGGTTGCTG
GGAACACCAAACGAACAAGTGTGGCCTGGAGTGAGCAAACTCAAGGACTGGCATGAATACCCACAGTGGAAACCTTTGAGCCTCTC
AACAGCTGTTCCAAACCTTGATGAGTCCGGACTTGATCTCTTATCAAAAATGCTGGAGTATGAGCCAGTTAAACGAATTTCAGCTA
AGAAGGCTATGGAGCATCCTTACTTCGATGATCTACCTGACAAATCCCTTCTCTGAGGATCTCTTTATGAACGAACTACTCTCTCT
CTCTCTGTAGTCTTGTTTGTTCCAACTTTGTCATTGCTGTCTCAAGCACCTTATCTTGCTCTCTTAGTAGGATGATCAACTTTTTC
AAATTTCCCTTGGCATTGGGGTCTATGTTCCCAGTTGTATAACCAACCCTCTACTTCGTTAACATTGATAACACAATTTGCAAATG
TC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173517 cyclin-dependent kinase B2-2 [Arabidopsis thaliana]8642e-090
XP_002893139 cyclin-dependent kinase B2_2 [Arabidopsis lyrata subsp. lyrata]8642e-090
AAM61014 putative cell division control protein cdc2 kinase [Arabidopsis thaliana]8482e-088
CBJ18167 cyclin dependent kinase B2 [Cucurbita maxima]7943e-082
AEN02468 cyclin-dependent kinase [Camellia sinensis]7934e-082

Swiss-Prot top hits (Blast detail)Scoree value
Q8LG64 Cyclin-dependent kinase B2-28649e-092
Q8LF80 Cyclin-dependent kinase B2-17851e-082
Q38775 Cell division control protein 2 homolog D7572e-079
Q0J4I1 Cyclin-dependent kinase B2-16963e-072
Q8L4P8 Cyclin-dependent kinase B1-15386e-054

TrEMBL top hits (Blast detail)Scoree value
A5C3L8 Putative uncharacterized protein7852e-081
B9R8U3 CDK, putative7852e-081
B8R3A3 Cyclin-dependent kinase B7825e-081
B7FK14 Putative uncharacterized protein7808e-081
P93323 Cdc2MsF protein7808e-081

Arabidopsis top hits (Blast detail)Scoree value
AT1G20930.1 CDKB2;2 (CYCLIN-DEPENDENT KINASE B2;2); cyclin-dependent protein kinase/ kinase8648e-093
AT1G76540.1 CDKB2;1 (cyclin-dependent kinase B2;1); cyclin-dependent protein kinase/ kinase/ protein binding7851e-083
AT3G54180.1 CDKB1;1 (CYCLIN-DEPENDENT KINASE B1;1); cyclin-dependent protein kinase/ kinase/ protein binding5304e-054
AT2G38620.2 CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinase5242e-053
AT2G38620.1 CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinase5224e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
121  33%

Unigene MembersMember information